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berkeley_reactor_200306_biofilm_scaffold_151446_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 18369..19115

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF8EE2 related cluster n=1 Tax=unknown RepID=UPI0003CF8EE2 similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 248.0
  • Bit_score: 411
  • Evalue 4.50e-112
Prolyl 4-hydroxylase {ECO:0000313|EMBL:ESY76923.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 248.0
  • Bit_score: 411
  • Evalue 6.40e-112
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 248.0
  • Bit_score: 406
  • Evalue 5.40e-111

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Taxonomy

Mesorhizobium sp. LNHC221B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGAACGCCCCCTCCATCATCCCCGCGGTGCCGGCCGTCCGCTCAGCCGAGGAACGGGTCGGCCGCCTGGACTGGCCGGCCCTCGCCGCCGAGCTCGACGGCCATGGCTGCGCCGTCCTCAGCAAGCTGCTGACCCCGGCGGAGTGCGCCGCCATCGCCGCGCTTTACCCGCAGGAGGCGCATTTCCGCAGCCATGTCCACATGGCGCGGCACGGCTTCGGGCAGGGCGAATACCGCTATTTCCGCTATCCCCTGCCCGACCTCGTCGGGGGGATGCGCACCGCGCTCTATCCGCATCTGGCGCCGATCGCCAATGCCTGGAACGGGCGCATGGGCGAGGCGACGCGCTATCCCGCCGAGCACGCCGCCTTCCTGACGCTCTGCCGAGAGGCCGGGCAGACCAGGCCGACGCCGCTGCTGCTGCAATACGGCGCGGGCGACTTCAACTGCCTGCACCAGGACCTCTATGGCGACCTCGCCTTCCCGATCCAGGTGGCGATCCTCCTGTCCGAGCCCGGCCGCGACTTCACCGGCGGCGAGTTCGTGCTGACCGAGCAGCGTCCGCGCATGCAGAGTCGCGCCGAGGTCGTGCCGCTTCGCCAGGGCGATGCCGTCGCCTTCGCCGTGCACAACCGGCCGGTGCAGGGGAGCCGGGGTCCTTACCGGGTCAACCTGCGCCACGGCGTCAGCCGCCTCAGATCCGGGCAGCGCCACACCGTCGGGATCATCTTTCATGACGCGCGATAG
PROTEIN sequence
Length: 249
MNAPSIIPAVPAVRSAEERVGRLDWPALAAELDGHGCAVLSKLLTPAECAAIAALYPQEAHFRSHVHMARHGFGQGEYRYFRYPLPDLVGGMRTALYPHLAPIANAWNGRMGEATRYPAEHAAFLTLCREAGQTRPTPLLLQYGAGDFNCLHQDLYGDLAFPIQVAILLSEPGRDFTGGEFVLTEQRPRMQSRAEVVPLRQGDAVAFAVHNRPVQGSRGPYRVNLRHGVSRLRSGQRHTVGIIFHDAR*