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berkeley_reactor_200306_biofilm_scaffold_151446_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(21176..21925)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type polar amino acid transport system, ATPase component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXT1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 251.0
  • Bit_score: 421
  • Evalue 5.70e-115
ABC-type polar amino acid transport system, ATPase component {ECO:0000313|EMBL:EIM28773.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 251.0
  • Bit_score: 421
  • Evalue 8.10e-115
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 248.0
  • Bit_score: 406
  • Evalue 4.10e-111

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGCACGAGAACGCCATGCCCCACGCCCCGATCGTCTCCCTCAGGGACGTGCACAAGAGCTTCGGCTCGCTGAAGGTCCTCGACGGCGTCAGCTTCTCGGTGGAGCGCGGCGAGGTGCTCGTCCTGATCGGCCGCTCCGGCTCCGGCAAGAGCACGGCGCTACGCTGCATCGACCGCTTCGAGCGGATCGACGAGGGAGCGATCGAGGTCTGCGGCCATCGCGTCGACGATCCCGGGGTCGACCTGCGCGCCCTGCGCCAGGACGTCGGCATCGTGTTCCAGAGCTACAACCTGTTTCCGCACCTGACCATCGAGGAGAACATCATCCTCGCCCCCTGCGCCGTGAAGGGGATGGCGAAGGGGCAGGCCCGGGACCTGGCGAGGCAGGTCCTCGCCCAGGTCGGGCTGGAGGACAAGCTCCACTCCTATCCCGAGCAGCTCTCCGGCGGCCAGCAGCAGCGCGGGGCGATCGCCCGCTCGCTCGCCATGCAGCCCAAGGTGATGCTGTTCGACGAGGTGACCTCGGCGCTCGACCCCGAACTGACGGGGGAAGTGCTGAGGGTCATCGAGGCGCTCGCGGCGGACGGCATGACCATGGTGATGGTCACGCACGAGATGGGATTTGCCAGGGGCATCGCCGACACGGTGGTGTTCATGCACCGGGGCAAGGTCCACGAGGCGGGAACGACCGCCATCCTTGCTTCCCCCGCCACGCCCGAACTCGCACAGTTCGTCGGCACGGGGCTCTGA
PROTEIN sequence
Length: 250
MHENAMPHAPIVSLRDVHKSFGSLKVLDGVSFSVERGEVLVLIGRSGSGKSTALRCIDRFERIDEGAIEVCGHRVDDPGVDLRALRQDVGIVFQSYNLFPHLTIEENIILAPCAVKGMAKGQARDLARQVLAQVGLEDKLHSYPEQLSGGQQQRGAIARSLAMQPKVMLFDEVTSALDPELTGEVLRVIEALAADGMTMVMVTHEMGFARGIADTVVFMHRGKVHEAGTTAILASPATPELAQFVGTGL*