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berkeley_reactor_200306_biofilm_scaffold_151446_23

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(22598..23281)

Top 3 Functional Annotations

Value Algorithm Source
Polar amino acid ABC transporter inner membrane subunit n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G9F3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 227.0
  • Bit_score: 369
  • Evalue 1.40e-99
ABC transporter permease {ECO:0000313|EMBL:KGT76613.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 227.0
  • Bit_score: 370
  • Evalue 1.50e-99
polar amino acid ABC transporter inner membrane subunit similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 227.0
  • Bit_score: 369
  • Evalue 3.90e-100

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Taxonomy

Bradyrhizobium japonicum → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGGGCCTCGATCTCGATTTCACGACCGTCCTGGAGCGATGGCAGAGCCTGCTCGACGGGGCGGTGCTGACGCTTGAGCTGGCGCTGATGGCGACGGTGCTCGGCGCCGCGATCGGCGTGCTCGGCGCCATCGGCCGCGGCAGCGCCAGCCGCGCCGTCGCCGGGGCCTGCGGCTTCTATGTCGAGGCGATCCGCAACACGCCGCTGCTGGTGCAGATCTTCCTGGTCTATTTCGGGCTTGCCAGCATCGGGTTGAAGCTCTCGGCCTTCACCGTGGCCGCGACGGCGCTGACCATCAATGTCGGCGCCTACACCACCGAGATCATGCGGGCCGGGTTCGACGCCATCCCCAGGGGCCAGATCGAGGCGGCCGAGGGCCTCGCCCTGTCGCGCGTCCAGATCTACTGGCACATCATCCTGCTGCCGGCGGTCGAGAGGGTCTATCCCGCGCTCACCAGCCAGTTCGTGCTCCTGATGCTGGCCTCCTCGGTCACCTCGCAGATCTCGGCGGAGGAGCTGACCGCCGTCGCCAACTACATCCAGTCAGACACCTACCGCGCCTTCGAGACCTACATCCTCGTCGCCCTCATCTACGTCGTCCTGTCGCTCGTGATGCGGACCGGCTTCTGGGGCCTCGGCCTCGTCCTGTTTCCGCGCCGGCGCCGGCTCGGCACGCCCTTATAG
PROTEIN sequence
Length: 228
MGLDLDFTTVLERWQSLLDGAVLTLELALMATVLGAAIGVLGAIGRGSASRAVAGACGFYVEAIRNTPLLVQIFLVYFGLASIGLKLSAFTVAATALTINVGAYTTEIMRAGFDAIPRGQIEAAEGLALSRVQIYWHIILLPAVERVYPALTSQFVLLMLASSVTSQISAEELTAVANYIQSDTYRAFETYILVALIYVVLSLVMRTGFWGLGLVLFPRRRRLGTPL*