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berkeley_reactor_200306_biofilm_scaffold_151446_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 25176..25688

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Sphingomonas wittichii RepID=UPI0002D58E3A similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 166.0
  • Bit_score: 205
  • Evalue 3.40e-50
methylated-DNA--protein-cysteine methyltransferase similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 165.0
  • Bit_score: 201
  • Evalue 1.40e-49
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:ABQ66919.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 165.0
  • Bit_score: 201
  • Evalue 6.80e-49

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Taxonomy

Sphingomonas wittichii → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGGACCCTATCCGCTACGCCCTTGGGCAGAGCTCGCTCGGCAGCTTCGTCGTCGCCCTCTCCCGGCAGGGGCTCGTCGCCTTCGAATTCGCCGATGGCGGCGCAGCCTTGGACACGCTGCGGGCCCTGCTCCCGGATGCGGTGCTCGAACAGGACCAGGAGGGCCTGTCCGATCTCGTCGGCAAGCTCGAGCGGCTCGTCGACGAGCCCGGCACTGATCCGGGCATCGCGCTCGATCCGCAGGGCACGGCCTATGAGAAACAGGTCTGGTCGCTGCTGCGCGAGATTCCCGCCGGCGAGACCACCACCTATGGCGCCCTCGCCGCACGGCTCGGCACCCGCGATGCCCGCGACGTGACGCAGGCCATCGCCGCCAACCCGATCGCCATCCTCGTCCCCTGCCACCGCGTGGTGAAGAAGGACGGCTCGCTCTCGGGCTATCGCTGGGGCTTCAGGCGCAAGCGCGCCCTGCTCGAGCGCGAGCGCCGGGCCGCGCCGTTCCGGCTGGCGTGA
PROTEIN sequence
Length: 171
MDPIRYALGQSSLGSFVVALSRQGLVAFEFADGGAALDTLRALLPDAVLEQDQEGLSDLVGKLERLVDEPGTDPGIALDPQGTAYEKQVWSLLREIPAGETTTYGALAARLGTRDARDVTQAIAANPIAILVPCHRVVKKDGSLSGYRWGFRRKRALLERERRAAPFRLA*