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berkeley_reactor_200306_biofilm_scaffold_151446_29

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(27770..29221)

Top 3 Functional Annotations

Value Algorithm Source
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MLY8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 476.0
  • Bit_score: 783
  • Evalue 1.10e-223
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit {ECO:0000313|EMBL:CCW17996.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 476.0
  • Bit_score: 783
  • Evalue 1.60e-223
hyfF; hydrogenase 4 subunit F similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 484.0
  • Bit_score: 758
  • Evalue 1.10e-216

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1452
ATGAGCCTGTCCGCTCTCGACGGTCAGACCGCGCTGATCCTGACGATTCCCCTCGTCACCGCGCTCCTGCTGGCGTTCCTAGCCAACCATCGCCTGTCGGCCCGGCTCAATGCCCTGTCGGCGCTGCTGACCTTGCTCGCGGCGCTCTCCCTGCTCGCCCACAAGCCCGAGCCCGGTCCCTATATCCTGGTCGACGACCTCAACATCGTCTTCATCGTCCTCAACAGCTTCGTCGGTTTCACCACCAGCCTGTTCAGCGCCAGCTATATCGCCCATGAGCTCGAGACCGGCCGGCTGACGCCGGCGCATCTGCGCTTCTACCACGCGATGTACCAGGTGCTGCTGTTCGCCATGAACCTCGCCCTCCTCGCCAACAATATCGGCGTGATGTGGGTGGCGATCGAGATGGCGACGCTGACCACCGTGATCATGGTCGGCCTCTACCGCACCGAAGCGGCGATCGAGGCGGCCTGGAAATACTTCATCCTCGGCAGCGTCGGCATCGCTCTGGCGCTGTTCGGCACGATCCTGGTCTACATGGCGGCCCGCCCGGTGGTCGGCGAGGGTCTCGACGGCATGGTCTGGACGGTGCTGATCGCCCATGTCGCCGCCTTCGATCCGGCCCTGCTCAACATCGCCTTCGTCTTCCTCATCCTCGGCTACGGCACCAAGGTCGGCCTGGTGCCGCTGCATGCCTGGCTGCCCGACGCCCATGCCGAGGGCCCGACCCCGATCTCGGCCGTGCTCTCGGGCCTGCTGCTCAACGTCGCGCTCTACGCCGTGCTGCGCTTCAAGCTGCTGCTCGCCGCCAATGCCGGAGCGATCGCGCCCGGCCCGCTGATGGCGGCGATGGGCCTGGTCTCGCTGATCTTCGCCGGCTTCATGCTGTACCGCCGCCGCGACATGAAGCGCCTGTTCGCCTATTCCTCGATCGAGCACATGGGCATCATCACCTTTGCCTTCGGCATGGGCGGGCCGCTGGCCAATTTCGCCGGGCTGCTGCACATGACCATGCACAGCCTGACCAAGTCGGCGATCTTCTTCGCCGTCGGCCATATCGCCCAGGCCAAGGGCACGCAGCGCCTGTCGGAGATCCGAGGCCTGACCGCGACGCACCCGCTGCTCGGCTGGAGCCTGGTCGCCGGCGTCGCCGCCATTGCCGGCCTGCCGCCGCTCGGCATCTTCATGAGCGAGTTCCTGGTGGTGAGCTCGACCTTCGCCCGCGAGCCGCTCCTCGCAGTGCCGCTGGTGGCGGGGCTGCTGGTCGCCTTCGGGGCGCTGGCGCTGCGGTTGCATGATGTCGCCTTTGGCGAGCCGACCGGCAGCATCGTGCCGGTGCAGGCCTCCACCGTGCCGCTGGTCGCCCATCTGGGGCTGGTGCTGACGGCCGGCATCTACCTCCCCGCGCCGCTGGTCGCCTGGTTCCAGCACGTCGCGGGCCTGCTCGGATAG
PROTEIN sequence
Length: 484
MSLSALDGQTALILTIPLVTALLLAFLANHRLSARLNALSALLTLLAALSLLAHKPEPGPYILVDDLNIVFIVLNSFVGFTTSLFSASYIAHELETGRLTPAHLRFYHAMYQVLLFAMNLALLANNIGVMWVAIEMATLTTVIMVGLYRTEAAIEAAWKYFILGSVGIALALFGTILVYMAARPVVGEGLDGMVWTVLIAHVAAFDPALLNIAFVFLILGYGTKVGLVPLHAWLPDAHAEGPTPISAVLSGLLLNVALYAVLRFKLLLAANAGAIAPGPLMAAMGLVSLIFAGFMLYRRRDMKRLFAYSSIEHMGIITFAFGMGGPLANFAGLLHMTMHSLTKSAIFFAVGHIAQAKGTQRLSEIRGLTATHPLLGWSLVAGVAAIAGLPPLGIFMSEFLVVSSTFAREPLLAVPLVAGLLVAFGALALRLHDVAFGEPTGSIVPVQASTVPLVAHLGLVLTAGIYLPAPLVAWFQHVAGLLG*