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berkeley_reactor_200306_biofilm_scaffold_158730_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(3..839)

Top 3 Functional Annotations

Value Algorithm Source
permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037864D1 similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 264.0
  • Bit_score: 286
  • Evalue 2.50e-74
Permease {ECO:0000313|EMBL:KJC51506.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 264.0
  • Bit_score: 285
  • Evalue 5.90e-74
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 264.0
  • Bit_score: 283
  • Evalue 5.90e-74

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Taxonomy

Bradyrhizobium sp. LTSP849 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 837
ATGACCGGCGGCGCGACCGGTCCCGCCGCGGTGGCCTCGCCGCTCTGGTTCGCCCGCCACGAGCTGCGCTTCGCCTGGCGCGACTTCCACGGCATGCTGACGGCGGGACGGCGCCACCGGGCGCGCACGGTGCTGGTGGCGGTGCTGGCGCTCGGCCTGTTCCTGCACGCCCTCGCCTGGAGCATCGCCGGCCCCTATGCCGGGGCGGCGTTCCCGCCGGACAAGCCGACGCTGGTGGCGGTCGCCGGCGGCGCCTTCCTGTCCTGGACGCTGATGCTGTCCCAGGCGATGGAATCGGTGACGCGCGCCTTCTACGCCCGTGCCGACCTCGACCTGATCCTGTCCTCGCCGGCACCGGCCCGCGCCGTGTTCGCCGTGCGGATCGGCGCCGTCGCCCTCGGCACCGCGGCCATGGCGATGCTGCTGGTCGGCCCCTTCGTCAACGTGCTCGCCGTCCTCGGCGGCGTGCGCTGGCTCGCCGCCTACGGCGTGCTCGTCGCCATGGCGCTCGCCGCCACCGGCATCGCCGTGGCCGCGACCACGGCGCTGTTCGCCGCCGTCGGGCCGCGCCGGACGCGCCTCCTCGCCCAGATCGTCGCGGCGGTGGTGGGCGCGGCCTTCGTCATCGGCGTGCAGGCGGTGTCGATCTTCAGCTTCGGCAGCCTGTCGCGCTTCGAGGGCCTGCGCTCCGACTGGATGCTGCGCCATGCGCCGGGGCTGGACAGCCCGCTCTGGTGGCCGGCCCGGGCCGCCATGGGCGAGGCCGCGACGCTGGCCGTGGTGCTGGCGGGGGCGCTGGCGCTGCTGCTCGCGGCGGTCGCGGCCGCCTCCGGCCGC
PROTEIN sequence
Length: 279
MTGGATGPAAVASPLWFARHELRFAWRDFHGMLTAGRRHRARTVLVAVLALGLFLHALAWSIAGPYAGAAFPPDKPTLVAVAGGAFLSWTLMLSQAMESVTRAFYARADLDLILSSPAPARAVFAVRIGAVALGTAAMAMLLVGPFVNVLAVLGGVRWLAAYGVLVAMALAATGIAVAATTALFAAVGPRRTRLLAQIVAAVVGAAFVIGVQAVSIFSFGSLSRFEGLRSDWMLRHAPGLDSPLWWPARAAMGEAATLAVVLAGALALLLAAVAAASGR