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berkeley_reactor_200306_biofilm_scaffold_158730_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 8807..10564

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated protein, Csd1 family n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VMU0_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 589.0
  • Bit_score: 845
  • Evalue 2.20e-242
Csd1 family CRISPR-associated protein similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 589.0
  • Bit_score: 845
  • Evalue 6.30e-243
CRISPR-associated protein, Csd1 family {ECO:0000313|EMBL:ADU44692.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 589.0
  • Bit_score: 845
  • Evalue 3.10e-242

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1758
GTGAGCGCCCTCGCCGCCCTGGTTCGCGCCTATGACCGCATGGCCGCGCGCCACGAGGTGCCGGCCTTCGGCTATTCCCAGGAGAAGATCGGCTTCCTCATCCCGCTGAACGAGGACGGAACGCCCGCCGGGTTGCCGATCGACCTGCGCCGGGGCGAAGGACGCAAGCGGGCGGCACCGCTGATGCCGGTGCCGCAGCCCACCAAGCGCACCTCCGGCATCGCGCCAAACCTCCTCTGGGACAAGACGGCCTATGTGCTCGGCGTCACCGCCGGCGAGGGCCGGCGCACCGCCCAGGAGCACGAGGCCTTCCGGGAGCGCCATCGCCAATGGCTCGCGGGCTCGAACGACCCGGGCCTGCAGGCGCTGCTGGGCTTCCTCGATGGATGGGCGCCGCAACGCTTCGCCGAGCTCGGCTGGCCCGAGGAGATGAAGGACCAGAACGTCGTCTTCGCGCTCGAAGGCGAGCGGCTCGACGGCGTCATGATCCATGACCGCCAGGCGGCGCGCGACCTCTGGGCGCGGCTCTCCGCCGCCGACGGACGCGGCGAGGCCGCCTGCCTCGTCACCGGCGAGCGCGGGCCGGTGGCCCGGCTCCATCCCGCCGTCAAGGGCGTGTGGGGCGCGCAATCCTCCGGCGCCTCGATCGTCTCCTTCAATCTCGACGCCTTCACCTCCTACGGCCACGAGCAGGGCGACAATGCTCCCGTCTCGGAGGCGGCCGCCTTCGCCTATGCCTCCGCCCTCAACCGCTTCCTGGAACGGGACAGCGGCCACCGCATCCAGATCGGCGATGCCTCGACCGTGTTCTGGGCGGATGCCTCAGCCGCCCTGGCCGGGCAGGCGGAGAAGCTGTTTGCCGCCTTCTTCGTGGACGAGCGCCAGGCGGACACGGCGGAGGAGCGCAAGGTCGAAGCCTGGCTCGCCGGGCTGCGGGAGGGGCGCCCGGTCGAGGACCTGCGGCCCGACCTGCCGCCGGGCGTGCGCTTCTTCGTCCTCGGCCTCGCCCCCAATGCGGCCAGGCTCTCGATCCGCTTCTATCTGGAGGACGAGTTCGGCGTGATTGCCGAGCGCTATCTCCGGCATCTCGCCCGCATGCGCATCGAGCCGCCGCCGCGGCAGGAGGGGCCGTCGATGTGGCGGCTGCTGATCGAGACCGCCGTGCTGCGCAAGAGCGAGAACATCCAGCCCAACCTCGCCGGCGCATGGATGCGGTCCATCCTGACCGACACGCCCTACCCGCGGACGCTGCTCTCGGCGCTGATCATGCGCCTGCGCGCCGACCACGACGTCAACGCCCTGCGCGTCGCCATCCTGAAATCCGTGCTGATCCAGAACTACGCAATGGAGGTGCCCGTGTCGCTGGACCCCGCCTTCAAGGACCCGGGCTATCTGCTCGGGCGCCTGTTCGCCGTCTACGAGCAGGTGCAGACCGCGGCGCTCGGCCGCGAGGTCAACGCCACGATCAAGGACAAGTTCTACGGCGCCGCCGCCGCGCAGCCGCGCAAGGTCTTTCCCCTGCTCGAGCGGGGGTCGGCGCCGCATCTGTCCAAGATCGGCAAGCAGAACAAGGGCCGGAAGGTCAACCTGGAGATATTGCTCGGCGAGATCATGGAGACGATGTCGCCCGGCGAGGATCCCTTCCCCGCCAGCCTGCCCGAGAGGAGCCAGGCGCTGTTCGCGCTCGGCTACTACCACCAGCGCAACGATTTCTTCCGCAAGCCCGACAAGACGTCTCCGGAGGCCGCGCCCCAATGA
PROTEIN sequence
Length: 586
VSALAALVRAYDRMAARHEVPAFGYSQEKIGFLIPLNEDGTPAGLPIDLRRGEGRKRAAPLMPVPQPTKRTSGIAPNLLWDKTAYVLGVTAGEGRRTAQEHEAFRERHRQWLAGSNDPGLQALLGFLDGWAPQRFAELGWPEEMKDQNVVFALEGERLDGVMIHDRQAARDLWARLSAADGRGEAACLVTGERGPVARLHPAVKGVWGAQSSGASIVSFNLDAFTSYGHEQGDNAPVSEAAAFAYASALNRFLERDSGHRIQIGDASTVFWADASAALAGQAEKLFAAFFVDERQADTAEERKVEAWLAGLREGRPVEDLRPDLPPGVRFFVLGLAPNAARLSIRFYLEDEFGVIAERYLRHLARMRIEPPPRQEGPSMWRLLIETAVLRKSENIQPNLAGAWMRSILTDTPYPRTLLSALIMRLRADHDVNALRVAILKSVLIQNYAMEVPVSLDPAFKDPGYLLGRLFAVYEQVQTAALGREVNATIKDKFYGAAAAQPRKVFPLLERGSAPHLSKIGKQNKGRKVNLEILLGEIMETMSPGEDPFPASLPERSQALFALGYYHQRNDFFRKPDKTSPEAAPQ*