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berkeley_reactor_200306_biofilm_scaffold_158730_10

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 10561..11514

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated protein, Csd2 family n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VMU1_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 315.0
  • Bit_score: 528
  • Evalue 2.50e-147
protein Csd2 family protein similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 315.0
  • Bit_score: 528
  • Evalue 7.00e-148
CRISPR-associated protein, Csd2 family {ECO:0000313|EMBL:ADU44693.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 315.0
  • Bit_score: 528
  • Evalue 3.50e-147

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGACAGCCCTCGCCAACCGCTACGACATCGTCTTCCTCTTCGACGTCGTCAACGGCAATCCCAACGGCGACCCCGACGCCGGCAACCTGCCGCGCATGGATCCCGAGACCAGCCACGGCCTCGTCAGCGACGTGTCGCTCAAGCGCAAGATCCGCAACTACACCGAGCTCGCCCGCGGCGGCGAGCCTGGCTACCGCATCTACGTGCAGGAGGGCGCGATCCTCAACGAGCGGCACCGCGAGGCCTACAAGGCGGTCCGCGGCGATACCGACAAGGTCACCAGGGATGCTAAGCTGAACCCGCAGAACGACGCCGAGTCGCGCGCCGTCACGCGCTTCATGTGCGAGAATTTCTACGACGTCCGCAGCTTCGGCGCGGTGATGAGCACCGGCATCAATGCCGGCCAGGTGCGCGGCCCGGTGCAGGTCACCTTCGCCACCTCCGTCGAGCCGATCCTGCCGCTGGAGATCTCCATCACCCGCATGGCGGCGACCAGCGAGAAGGAGAAGGCCGACCGGGACAAGGGGAGCGAAGGCGACGAGCGCACGGAGAACCGCACCATGGGCCGCAAGCACATCGTGCCCTACGGCCTCTACCGGGCCCATATCTTCGTCAACGCCAAGCTGGCGGAAAGGACCGGCTTCAGCCAGGCGGACCTCGACCATCTCTTCGCCGGCCTGTCGGCGATGTTCGAGCACGACCGCTCGGCCGCGCGCGGCGAGATGGCCTCGCGGCGCATCGTCGCCTTCAAGCACGCCTCGGCGCTCGGCAATGCGCCGGCCCAGGCTCTGTTCGACCGCGTCAAGGTGCGCCGCCGGATCGGCGACGAGCTCTACGATCCCGGCAGCGCCCGCCTCGACAACTTGCCGCCGGCCCGGCGCTTCGCCGACTACGCCGTCACGGTCGACCGCGACGGCCTGCCGGACGGGGTCGAGGTGATCGAGCCGTCCTGA
PROTEIN sequence
Length: 318
MTALANRYDIVFLFDVVNGNPNGDPDAGNLPRMDPETSHGLVSDVSLKRKIRNYTELARGGEPGYRIYVQEGAILNERHREAYKAVRGDTDKVTRDAKLNPQNDAESRAVTRFMCENFYDVRSFGAVMSTGINAGQVRGPVQVTFATSVEPILPLEISITRMAATSEKEKADRDKGSEGDERTENRTMGRKHIVPYGLYRAHIFVNAKLAERTGFSQADLDHLFAGLSAMFEHDRSAARGEMASRRIVAFKHASALGNAPAQALFDRVKVRRRIGDELYDPGSARLDNLPPARRFADYAVTVDRDGLPDGVEVIEPS*