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berkeley_reactor_200306_biofilm_scaffold_158730_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 11528..12181

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated protein Cas4 n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VMU2_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 217.0
  • Bit_score: 317
  • Evalue 7.80e-84
PD-(D/E)XK nuclease superfamily protein {ECO:0000313|EMBL:CEJ15578.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 210.0
  • Bit_score: 326
  • Evalue 2.40e-86
CRISPR-associated protein Cas4 similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 217.0
  • Bit_score: 317
  • Evalue 2.20e-84

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 654
GTGCCCGAGCCCGAAGAGCCGATCCCGATCTCCGCGCTCCAGCACGCCGTCTATTGCCTGCGCCAGGCTGCGCTCATCCATATCGAGCGCCTGTGGGAGGAGAATCGCTTCACGGCGGAAGGGCGGATCCTGCACGAAGCCGCGCACGAGCCGGGCGAGCGCAAGCGGGCGGGCATACGCCGCGCCACCGCGTTGCCCCTGGCCTGCCGCCGGTTGAACCTCGCCGGCGTCGCCGACCTCGTCGAGTTTCATGCCGCAGGGGATGGCGAGATCGCCTTTCCCGTGGAGTACAAGCGCGGCAAGGCCAAGCTCCACCGGGCCGATGAAGTCCAGCTCTGCGCACAGGCCCTCTGCCTGGAGGAGATGACCGGCCGGCCGGTGCCCGAAGGCGCGCTGTTCTATGCCGAGACGCGACGACGCGCGATCATTCCCTTCGACCCCGAGCTGCGCCGGCTCACCGAGGAGACGGCCTCGCAGCTCGGCGCGCTGTTCGCAGCGCGCCGCACGCCACCGGCGGTCTATCGTGCCGACCGCTGCCGCGCCTGCTCGCTGATCGACACCTGTCGGCCGAAGGCCGCGGCCCGATCGGCGCTCGGCTTCCGCACGCGCGCCATCGAGGCCGTCCTGGCCGGTCTCGGCGAGGAGCCGCCGTGA
PROTEIN sequence
Length: 218
VPEPEEPIPISALQHAVYCLRQAALIHIERLWEENRFTAEGRILHEAAHEPGERKRAGIRRATALPLACRRLNLAGVADLVEFHAAGDGEIAFPVEYKRGKAKLHRADEVQLCAQALCLEEMTGRPVPEGALFYAETRRRAIIPFDPELRRLTEETASQLGALFAARRTPPAVYRADRCRACSLIDTCRPKAAARSALGFRTRAIEAVLAGLGEEPP*