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berkeley_reactor_200306_biofilm_scaffold_158730_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 17928..18416

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent formate dehydrogenase gamma subunit n=2 Tax=Bradyrhizobiaceae RepID=F7QJW2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 156.0
  • Bit_score: 232
  • Evalue 2.50e-58
Uncharacterized protein {ECO:0000313|EMBL:EKS31832.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 156.0
  • Bit_score: 232
  • Evalue 3.50e-58
NADH dehydrogenase (ubiquinone) 24 kDa subunit similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 152.0
  • Bit_score: 221
  • Evalue 1.20e-55

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGCAGGCATACGAGGACGGGGCATACGAGGACTGGAACGCGGAACGGGCCGCCGCCATCATCGCTGCCGGCAAGGACCGCGAAGGGCCGCTCCTGCCCATCCTCCACGGCTTCATGGCGGCGTTCGGCTACGTGCCCGAGCCGGCGGTGCCGATGGTCGCCGAGGCGCTCAACCTGTCGCGCGCCGAGGTGCACGGGGTCGTCACCTTCTACCACGACTTCCGCCGCGAGCCGGCCGGGCGCCATGTGGTGAAGCTGTGCCGGGCGGAGTCCTGCCAGGCTGCCGGCTGCGAGCGCCTCGCCGACCATCTGGAGGAGAAGCTCGGCATCGGCTTCGGCGAGACCACGCCGGACGGCCGCGTCACGCTGGAGCCGATCTACTGCCTCGGTCTCTGCGCCCTTTCGCCCGCGGCGCTGATCGACGACCGCGTCGTCGCCCGCCTCGACGAGAAGCGCCTCGACGCCGTGCTGGCGGAGACGCTGCGATGA
PROTEIN sequence
Length: 163
MQAYEDGAYEDWNAERAAAIIAAGKDREGPLLPILHGFMAAFGYVPEPAVPMVAEALNLSRAEVHGVVTFYHDFRREPAGRHVVKLCRAESCQAAGCERLADHLEEKLGIGFGETTPDGRVTLEPIYCLGLCALSPAALIDDRVVARLDEKRLDAVLAETLR*