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berkeley_reactor_200306_biofilm_scaffold_158730_19

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 20172..23048

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent formate dehydrogenase alpha subunit n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJW4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 958.0
  • Bit_score: 1673
  • Evalue 0.0
NAD-dependent formate dehydrogenase alpha subunit {ECO:0000313|EMBL:EGP08579.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 958.0
  • Bit_score: 1673
  • Evalue 0.0
formate dehydrogenase, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 959.0
  • Bit_score: 1651
  • Evalue 0.0

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Taxonomy

Bradyrhizobiaceae bacterium SG-6C → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2877
ATGTCTCTCGTTCACGAAACCGACTACGGCACGCCTCTCTCGAAGTCCGAGAAGATGGTGTCGCTCACCATCGACGGCGTCGCGGTCTCCGTGCCCGAGGGCACCTCGATCATGCGCGCCGCCATGGAGATGGGCACGCAGATCCCCAAGCTCTGCGCCACCGACATGGTGGACGCCTGGGGCTCGTGCCGCATGTGCCTCGTCGAGATCGAGGGTCGCGCCGGCACGCCGGCCTCCTGCACCACGCCGGTCGCGCCGGGCATCGTGGTCCACACCCAGACCCAGCGGCTCAAGGAGATCCGCAAGGGCGTGATGGAGCTCTATATCTCTGACCATCCGCTCGACTGCCTCACCTGCGCCGCCAACGGCGATTGCGAATTGCAGGACGTGGCCGGCCAGGTCGGCCTGCGCGAGGTCCGCTACGGCTACGAGGGCGAGAACCACGTCTTCGCCAGGACCGACGGGCACGCCAACGAGAACTGGATGCCGCAGGACGGCTCCAACCCCTATTTCAACTATGATCCCGCCAAGTGCATCGTCTGCTCGCGCTGCGTGCGGGCCTGCGAGGAGGTGCAGGGCACCTTCGCGCTGACCATTTCCGGCCGCGGCTTCGACAGCCGCGTCTCGCCCGGCATGAACGAAGCCTTCTTCGAGTCCGAATGCGTCTCCTGCGGCGCCTGCGTCCAGGCCTGCCCGACGGCGACGCTGACGGAGAAGAAGGTGATCGAGATCGGCCAGCCCGAGCACTCGGTCGTCACCACCTGCGCCTATTGCGGCGTCGGCTGCGCCTTCAAGGCCGAGATGCGCGGCGAGGAGCTGGTGCGCATGGTGCCCTACAAGGACGGCAAGGCCCATCGCGGCCATTCCTGCGTCAAGGGCCGCTTCGCCTGGGGCTACGCCACCCACAAGGAGCGCATCCTGAAGCCGATGATCCGCGAGCGGATCAGCGACCCCTGGCAGGAAGTGACCTGGGAGCAGGCGATCGCCCACGCCGCCTCGGAGTTCAAGCGCATCCAGGCCAAGTACGGCAAGGATTCGATCGGCGGCATCACCTCCTCGCGCTGCACCAACGAGGAAACCTACCTGGTGCAGAAGCTGATCCGCGCCGGCTTCGGCAACAACAATGTCGACACCTGCGCCCGCGTCTGCCATTCGCCGACCGGCTACGGCCTCGGCCAGACCTTCGGCACCTCGGCCGGCACCCAGGACTTCGATTCGGTCGAGGACACCGACGTCGTCATCATCATCGGCGCCAACCCGACCGACGGCCACCCCGTCTTCGCCTCGCGCCTGAAGAAGCGGCTGCGCGCCGGGGCCCGGCTGATCGTCGTCGATCCGCGCAAGACCGACATCGTCCGCTCGGCCCATGTCGAGGCCGATTTCCACCTGCCGCTCCTGCCCGGCACCAATGTCGCCATGCTGACGGCGCTGGCCCATGTCATCGTCACCGAGGGCCTGGTCGACGAGGCCTTCGTGCGCGAGCGCTGCGACATGGAGGCGTTCCAGGCCTGGGCCGAGTTCGTGTCGGACCCGCGCCACAGCCCCGAGGCGGTGGAGCAATATACCGGCGTCAAGGCGGCGGACGTGCGCGGCGCGGCCCGGCTCTACGCCACCGGCGGCAACGGCGCGATCTATTACGGCCTCGGCGTCACCGAGCACAGCCAGGGCTCGACCACGGTGATGGCCATCGCCAATCTCGCCATGGCCACCGGCAATCTCGGCCGCAAGGGCGTCGGCGTGAACCCGCTGCGCGGCCAGAACAACGTGCAGGGCTCCTGCGACATGGGCTCCTTCCCGCACGAATTGCCGGGCTATCGCCATATCGGCACCGACAGCGTCCGCACCATGTTCGAGGAGTTCTGGGGCGCCAAGCTCGACAAGGAGCCGGGCCTGCGCATTCCCAACATGTTCGACGCCGCCGTCGACGGCTCGTTCAAAGGCCTCTACGTCCAGGGCGAGGACATCGTCCAGTCCGACCCGGACACCAAGCACGTCACGGCCGGGCTGGCGGCGATGGAATGCGTCGTCGTGCAGGACCTGTTCCTGAATGAGACCGCCAACTACGCCCATGTCTTCCTGCCGGGCTCGACCTTCCTGGAGAAGGACGGCACCTTCACCAATGCCGAGCGCCGCATCCAGCGCGTGCGCAAGGTGATGGCGCCCAAGGCCCGCTATGCCGACTGGGAGGTGACGCTGCTGCTGGCCGAGGCGATCGGCTACTCCATGCGCTACGAGCACCCCTCGCAAATCATGGACGAGATCGCCCGCCTCACCCCGTCCTTCGCCGGCGTCTCCTACGAGAAGCTGGAGGAGATGGGCTCGGTGCAGTGGCCCTGCAACGAGAAGGCACCCGAGGGCACGCCGATCATGCATATCGACCATTTCGTCCGCGGCCAGGGCCGCTTCATGATCACCGAGTACATCCCGACCGACGAGCGCACCGGATCGCGCTTCCCGCTGCTGCTGACCACCGGCCGCATCCTCAGCCAGTACAATGTCGGCGCCCAGACCCGGCGCACCGACAACTCGCTCTGGCATCAGGAAGACCTCCTGGAGATCCACCCGCACGACGCCGAGCAGCGCGGCATCCGCGAGGGCGACTGGGTCAAGCTCGATAGCCGCTCCGGCTCGACGTCCCTGCACGCCACCATCACCGAGCGCGTCGCCCCCGGCGTCGTCTACACCACCTTCCACCACCCCTCGACCCAGGCCAACGTCATCACCACCGACTATTCCGACTGGGCGACCAATTGCCCGGAATACAAGGTGACGGCGGTGCAGGTGATGCCCTCCAACGGGCCGACGGCCTGGCAGGAGGAGTACGAGGCGATGGCGAAGAACGCGCGGCGCATCGCCCTGCCCGAAGCGGCGGAGTGA
PROTEIN sequence
Length: 959
MSLVHETDYGTPLSKSEKMVSLTIDGVAVSVPEGTSIMRAAMEMGTQIPKLCATDMVDAWGSCRMCLVEIEGRAGTPASCTTPVAPGIVVHTQTQRLKEIRKGVMELYISDHPLDCLTCAANGDCELQDVAGQVGLREVRYGYEGENHVFARTDGHANENWMPQDGSNPYFNYDPAKCIVCSRCVRACEEVQGTFALTISGRGFDSRVSPGMNEAFFESECVSCGACVQACPTATLTEKKVIEIGQPEHSVVTTCAYCGVGCAFKAEMRGEELVRMVPYKDGKAHRGHSCVKGRFAWGYATHKERILKPMIRERISDPWQEVTWEQAIAHAASEFKRIQAKYGKDSIGGITSSRCTNEETYLVQKLIRAGFGNNNVDTCARVCHSPTGYGLGQTFGTSAGTQDFDSVEDTDVVIIIGANPTDGHPVFASRLKKRLRAGARLIVVDPRKTDIVRSAHVEADFHLPLLPGTNVAMLTALAHVIVTEGLVDEAFVRERCDMEAFQAWAEFVSDPRHSPEAVEQYTGVKAADVRGAARLYATGGNGAIYYGLGVTEHSQGSTTVMAIANLAMATGNLGRKGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHIGTDSVRTMFEEFWGAKLDKEPGLRIPNMFDAAVDGSFKGLYVQGEDIVQSDPDTKHVTAGLAAMECVVVQDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRIQRVRKVMAPKARYADWEVTLLLAEAIGYSMRYEHPSQIMDEIARLTPSFAGVSYEKLEEMGSVQWPCNEKAPEGTPIMHIDHFVRGQGRFMITEYIPTDERTGSRFPLLLTTGRILSQYNVGAQTRRTDNSLWHQEDLLEIHPHDAEQRGIREGDWVKLDSRSGSTSLHATITERVAPGVVYTTFHHPSTQANVITTDYSDWATNCPEYKVTAVQVMPSNGPTAWQEEYEAMAKNARRIALPEAAE*