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berkeley_reactor_200306_biofilm_scaffold_158730_25

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(29110..30648)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug transport protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9J8F6_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 518.0
  • Bit_score: 711
  • Evalue 3.30e-202
multidrug transport protein similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 518.0
  • Bit_score: 711
  • Evalue 9.50e-203
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EJK82853.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 518.0
  • Bit_score: 711
  • Evalue 4.70e-202

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1539
ATGAGCGAGGCGTCGCAGTCCGCCGTCCCGGCGCCGGAGGCGGCGCCGCCGACGCGCCGCGAGATCCGGGCGGTGTTCCTCGGCCTGATGATCGTGCTGGCGCTCGGCGCCATCGACCAGAGCATCGTGGCGACGGCGCTGCCGCGCATCGTCGGCGACCTCGGCGGCGTCGAGCACCTGTCCTGGGTAGTCACCGCCTATGTCCTGACCTCGACCACGACCATGCCGCTCTACGGCAGGCTCAGCGACCAGTATGGCCGCAAGCCGATGATCTACGCCGCCATCCTGATCTTCCTGCTCGGCTCGGTGCTGAGCGGGGCGGCGCAGACGCTGGTCCAGCTCATCCTGTTCCGCGCTGTCCAGGGCATCGGCGCCGGCGGGCTGATGCCGCTCGCCCAGATCATCATCGGCGACCTCGTGCCGCCGGCCCGGCGCGGCCGCCAGCAGGGGGCGATCGTCGCCGTCATGACCGTGTGCACCATCATCGGCCCGGTGCTCGGCGGCCTCATCACCGACCTGCTCTCCTGGCACTGGATCTTCTACGTCAACCTGCCGATCGGGGCGGCGGCTCTCGCCGTCATCGCCCGCACGCTGCCAAGCCGCCGCCCGGCCGGGTCGCGGCGGATCGACTATGCCGGCGCGGCGCTGCTGACCACCGGCACCACCGCCTTCCTGCTCGCCCTGACCCTGGGCGGGTCGCGCTGGCCCTGGCTGTCGCCCGAGATCGGGCTCGCCGCCGGCACGGCGCTGGCCTGCCTCGTCCTGTTCGTCCGGCATATCGGGCGCGAGCCGGAGCCGGTGCTGCCGCCGGCGCTGTTCGCCAACCGGCTCTTCCTCGTCGCCTGCCTGGTCCTCGCGCTGACCTTCATGGGCCTGCTCGGCGCCAGCCTGTTCTTCCCGCTGTTCTTCCAGGCGGTGATGGGCGCCAGCCCCTCCAGCTCCGGCCTGCTCACGGCGCCGCTGATGGTCGGCCTGGTGATCTCCTCCGTGTTCAACGGCCGGGTGCTGCTGCGCTCGGGCCGCTACAAGCCGGCGCAGCTCGTCGGCCTTGCCGTGGCCGTCACCGCTTTCGCCACGCTGGCCTGGGGCGTCGCCGACGCCTGGGGGCTGACCGCGATCGAGCCGGCGATGCTCCTGCTCGGCCTCGGGCTCGGCCTGGTCATGCCCAACATGACCATCGCCGTGCAGAACGCCCTGCCGACCGCGCATCGCGGCGTCGGCACGGCGGCGCTGGCCTTCTTCCGCTCGCTCGGCGGGCTGGTGGGCGTGGCCGGCGCCGGCGCCATCCTGGCCTGGCGGCTGCGGGCGGCCTCGCTCGGCGTGGAGGGCATGCCGGCCGAGGGCGGCATGCCCCACCTCACCGCCCTGGCGCCGGAGACCCATGCCGCGCTGGTCGAGCTCTACCGGCACGCCATCGCCACCACCTTCGCCGTCGGCACCGGCGTGGCGGCGCTGGGGCTGGTGGCGCTCCTGTTCCTGCCGGAGCTGCCGCTGCGCGCCCACCACGAGGCGGCCGGGCGTCCGGCGGCGGAAGCCTGA
PROTEIN sequence
Length: 513
MSEASQSAVPAPEAAPPTRREIRAVFLGLMIVLALGAIDQSIVATALPRIVGDLGGVEHLSWVVTAYVLTSTTTMPLYGRLSDQYGRKPMIYAAILIFLLGSVLSGAAQTLVQLILFRAVQGIGAGGLMPLAQIIIGDLVPPARRGRQQGAIVAVMTVCTIIGPVLGGLITDLLSWHWIFYVNLPIGAAALAVIARTLPSRRPAGSRRIDYAGAALLTTGTTAFLLALTLGGSRWPWLSPEIGLAAGTALACLVLFVRHIGREPEPVLPPALFANRLFLVACLVLALTFMGLLGASLFFPLFFQAVMGASPSSSGLLTAPLMVGLVISSVFNGRVLLRSGRYKPAQLVGLAVAVTAFATLAWGVADAWGLTAIEPAMLLLGLGLGLVMPNMTIAVQNALPTAHRGVGTAALAFFRSLGGLVGVAGAGAILAWRLRAASLGVEGMPAEGGMPHLTALAPETHAALVELYRHAIATTFAVGTGVAALGLVALLFLPELPLRAHHEAAGRPAAEA*