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berkeley_reactor_200306_planktonic_scaffold_165720

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_165720_1

Not on your lists

comp(1..252)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B3CC72
Uncharacterized protein {ECO:0000313|EMBL:KKL47001.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
berkeley_reactor_200306_planktonic_scaffold_165720_2
unknown

Not on your lists

comp(412..507)
DNA (96bp) protein (32aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_165720_3
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

841..3045
DNA (2205bp) protein (735aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
Catalase-peroxidase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R7I3_PIRSD
catalase/peroxidase HPI
berkeley_reactor_200306_planktonic_scaffold_165720_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3259..3894)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D7Q3_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA24875.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_5
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3950..5617)
DNA (1668bp) protein (556aa)
CoA-disulfide reductase n=1 Tax=Schlesneria paludicola RepID=UPI00029AA287
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ADV63269.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
berkeley_reactor_200306_planktonic_scaffold_165720_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(5614..6189)
DNA (576bp) protein (192aa)
Rhodanese-related sulfurtransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8D3_SINAD
rhodanese-related sulfurtransferase
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:AGA24876.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_7
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

6311..6673
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI0003772E72
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AKC81931.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
berkeley_reactor_200306_planktonic_scaffold_165720_8
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6879..8072
DNA (1194bp) protein (398aa)
Nitrate reductase [NADH] (EC:1.7.1.1)
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24305.1}; EC=1.7.1.1 {ECO:0000313|EMBL:AJG24305.1};; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
Sulfite dehydrogenase (Cytochrome) subunit apoprotein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q3T6_9RHOO
berkeley_reactor_200306_planktonic_scaffold_165720_9
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8062..8475
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00036A7F15
Uncharacterized protein {ECO:0000313|EMBL:KHD17814.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
berkeley_reactor_200306_planktonic_scaffold_165720_10
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8609..11233
DNA (2625bp) protein (875aa)
Cbb3-type cytochrome oxidase, subunit 1 {ECO:0000313|EMBL:AKF46353.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AKF46353.1};; TaxID=1324931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. syringae B301D.;"
Putative cytochrome C subunit protein n=1 Tax=Pseudomonas fluorescens (strain SBW25) RepID=C3K887_PSEFS
putative cytochrome C subunit protein
berkeley_reactor_200306_planktonic_scaffold_165720_11
unknown

Not on your lists

11239..11403
DNA (165bp) protein (55aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_165720_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11448..12059)
DNA (612bp) protein (204aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DB27_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26432.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12120..12824)
DNA (705bp) protein (235aa)
Protocatechuate 3,4-dioxygenase beta subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DC79_SINAD
protocatechuate 3,4-dioxygenase subunit beta
Protocatechuate 3,4-dioxygenase beta subunit {ECO:0000313|EMBL:AGA26433.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12982..14577)
DNA (1596bp) protein (532aa)
Membrane-associated lipoprotein involved in thiamine biosynthesis n=2 Tax=Singulisphaera acidiphila RepID=L0DKS6_SINAD
membrane-associated lipoprotein
Membrane-associated lipoprotein involved in thiamine biosynthesis {ECO:0000313|EMBL:AGA29979.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_15
unknown

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14793..16136
DNA (1344bp) protein (448aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_165720_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16349..16660)
DNA (312bp) protein (104aa)
Caa(3)-type oxidase, subunit IV n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGH8_SINAD
caa(3)-type oxidase, subunit IV
Caa(3)-type oxidase, subunit IV {ECO:0000313|EMBL:AGA27903.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16657..17355)
DNA (699bp) protein (233aa)
Heme/copper-type cytochrome/quinol oxidase, subunit 3 n=2 Tax=Singulisphaera acidiphila RepID=L0DEW6_SINAD
heme/copper-type cytochrome/quinol oxidase, subunit 3
Heme/copper-type cytochrome/quinol oxidase, subunit 3 {ECO:0000313|EMBL:AGA27904.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_18
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17342..18994)
DNA (1653bp) protein (551aa)
Cytochrome c oxidase, subunit I n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGD9_SINAD
cytochrome c oxidase subunit I
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:AGA27905.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_19
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(18991..19935)
DNA (945bp) protein (315aa)
Cytochrome c oxidase, subunit II n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGX8_SINAD
cytochrome c oxidase subunit II
Cytochrome c oxidase, subunit II {ECO:0000313|EMBL:AGA27906.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_20
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(20107..20943)
DNA (837bp) protein (279aa)
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=U3GM44_SINAD
hypothetical protein
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems {ECO:0000313|EMBL:AGA27907.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_21
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(20984..21463)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGI2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27908.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_22
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21466..22776)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEW8_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27909.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_23
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(22773..23387)
DNA (615bp) protein (205aa)
Cytochrome c n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGE3_SINAD
cytochrome c
Cytochrome c {ECO:0000313|EMBL:AGA27910.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_24
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23513..24082)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGY2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27911.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_25
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(24093..25502)
DNA (1410bp) protein (470aa)
Polysulfide reductase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DF89_SINAD
polysulfide reductase
Polysulfide reductase {ECO:0000313|EMBL:AGA27912.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_26
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(25492..28605)
DNA (3114bp) protein (1038aa)
Fe-S-cluster-containing hydrogenase subunit n=2 Tax=Singulisphaera acidiphila RepID=L0DGI6_SINAD
Fe-S-cluster-containing hydrogenase subunit {ECO:0000313|EMBL:AGA27913.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Fe-S-cluster-containing hydrogenase subunit
berkeley_reactor_200306_planktonic_scaffold_165720_27
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(28602..29252)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEX3_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27914.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_28
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

29774..31060
DNA (1287bp) protein (429aa)
Putative efflux protein, MATE family n=2 Tax=Singulisphaera acidiphila RepID=L0DGE7_SINAD
efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:AGA27915.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_29
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

31307..34684
DNA (3378bp) protein (1126aa)
WD40 repeat-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPJ6_SINAD
WD40 repeat-containing protein
WD40 repeat-containing protein {ECO:0000313|EMBL:AGA30768.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_30
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

34857..35090
DNA (234bp) protein (78aa)
Antitoxin of toxin-antitoxin stability system n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJW9_CHLTF
antitoxin of toxin-antitoxin stability system
Antitoxin of toxin-antitoxin stability system {ECO:0000313|EMBL:AEP13136.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Displaying items 1-30 of 73 in total

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