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berkeley_reactor_200306_planktonic_scaffold_165720

Search features with annotation key words

Displaying items 61-73 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_165720_61
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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73650..74036
DNA (387bp) protein (129aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D979_SINAD
bleomycin resistance protein
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily {ECO:0000313|EMBL:AGA25368.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_62
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(74085..74843)
DNA (759bp) protein (253aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYH5_PARAV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIA78327.1}; TaxID=83552 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae.;"
berkeley_reactor_200306_planktonic_scaffold_165720_63
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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74938..75417
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003815997
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AIA30649.1}; TaxID=1441628 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum YSK.;"
berkeley_reactor_200306_planktonic_scaffold_165720_64
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(75644..76486)
DNA (843bp) protein (281aa)
Uncharacterized protein {ECO:0000313|EMBL:KGE11340.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
Methyltransferase type 11 id=4748850 bin=GWC2_Methylomirabilis_70_16 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
type 11 methyltransferase
berkeley_reactor_200306_planktonic_scaffold_165720_65
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(76639..77967)
DNA (1329bp) protein (443aa)
Predicted dehydrogenases and related proteins n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EUY1_9BACT
Predicted dehydrogenases and related proteins
Predicted dehydrogenases and related proteins {ECO:0000313|EMBL:CCW35191.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
berkeley_reactor_200306_planktonic_scaffold_165720_66
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(78101..81046)
DNA (2946bp) protein (982aa)
WD-40 repeat n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C572D
Uncharacterized protein {ECO:0000313|EMBL:KDS87494.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_165720_67
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

81882..82289
DNA (408bp) protein (136aa)
putative transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029A97F8
transcription regulator BlaI
Tax=RBG_16_Planctomycetes_64_12_curated
berkeley_reactor_200306_planktonic_scaffold_165720_68
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

82286..85951
DNA (3666bp) protein (1222aa)
alkyl hydroperoxide reductase n=1 Tax=Schlesneria paludicola RepID=UPI00029A27ED
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA27703.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_69
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(86129..86686)
DNA (558bp) protein (186aa)
3-methyladenine DNA glycosylase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKI5_SINAD
3-methyladenine DNA glycosylase
3-methyladenine DNA glycosylase {ECO:0000313|EMBL:AGA29869.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_165720_70
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(86742..87278)
DNA (537bp) protein (179aa)
isochorismatase n=1 Tax=Schlesneria paludicola RepID=UPI000299FD2A
isochorismatase hydrolase
Nicotinamidase-related cysteine hydrolase {ECO:0000313|EMBL:ACM18557.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
berkeley_reactor_200306_planktonic_scaffold_165720_71
unknown

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comp(87461..87715)
DNA (255bp) protein (85aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_165720_72
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(87797..88813)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F7036F
Probable squalene-hopene cyclase {ECO:0000313|EMBL:EDL57980.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
N-acyl-D-aspartate/D-glutamate deacylase
berkeley_reactor_200306_planktonic_scaffold_165720_73
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

89121..90590
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6L8_9BACT
Tax=RBG_16_Planctomycetes_64_12_curated
Displaying items 61-73 of 73 in total

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