name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_planktonic_scaffold_253396_61
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(74248..75513)
|
CinA-like protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHJ1_9BACT
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
competence/damage-inducible protein CinA
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_62
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(75616..76473)
|
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037C9E9A
Uncharacterized protein {ECO:0000313|EMBL:CDI03547.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_63
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
76636..77139
|
TPR repeat-containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHA4_9BACT
TPR repeat-containing protein {ECO:0000313|EMBL:EEF60739.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_64
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
77198..77986
|
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH96_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF60731.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ABC transporter
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_65
uncultured bacterium, Bacteria
|
Not on your lists |
78153..78545
|
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZP17_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49398.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_66
unknown
|
Not on your lists |
79412..79939
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_253396_67
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(80229..81629)
|
Major facilitator superfamily MFS_1 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9N0_9BACT
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EEF63274.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
major facilitator superfamily MFS_1
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_68
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(82127..83866)
|
Putative ABC transporter, permease protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBL2_9BACT
Putative ABC transporter, permease protein {ECO:0000313|EMBL:EEF62897.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ABC transporter permease
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_69
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(83863..84630)
|
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBL3_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF62898.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ABC transporter-like protein
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_70
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
84806..85642
|
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
purine nucleoside phosphorylase (EC:2.4.2.-)
Purine nucleoside phosphorylase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJR6_9BACT
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_71
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
85623..86021
|
Cytidine deaminase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJR5_9BACT
Cytidine deaminase {ECO:0000313|EMBL:EEF59941.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Cdd; cytidine deaminase
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_72
RLO_RIF05_58_11, RIF5, Bacteria
|
Not on your lists |
86074..87594
|
Response regulator receiver n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NRZ0_9DELT
PAS/PAC sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_73
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
87622..88503
|
Transcriptional regulator, LysR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJR3_9BACT
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEF59939.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
LysR family transcriptional regulator
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_74
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(88629..89738)
|
Peptidase M29 aminopeptidase II n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJR2_9BACT
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:EEF59938.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
aminopeptidase
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_75
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
89821..91746
|
O-antigen polymerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBG9_9BACT
O-antigen polymerase {ECO:0000313|EMBL:EEF62854.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
O-antigen polymerase
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_76
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
91841..92647
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBG8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62853.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_77
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
92732..94990
|
Adenylate/guanylate cyclase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBG7_9BACT
Adenylate/guanylate cyclase {ECO:0000313|EMBL:EEF62852.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
adenylate cyclase
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_78
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
95047..95532
|
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBG6_9BACT
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_79
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
95563..96042
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBG5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62850.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
metal-binding protein
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_80
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
96089..96235
|
50S ribosomal protein L32 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF58_GEOUR
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_81
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
96262..97290
|
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Phosphate acyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBG4_9BACT
phosphate acyltransferase
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_82
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
97287..98312
|
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBG3_9BACT
3-oxoacyl-ACP synthase
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_83
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
98362..98697
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBG2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62847.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_84
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
98844..99926
|
PfkB domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVU9_9BACT
PfkB domain protein {ECO:0000313|EMBL:EDY21541.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ribokinase-like domain-containing protein
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_85
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria
|
Not on your lists |
100033..101307
|
Uncharacterized protein id=4444156 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_86
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
101411..102508
|
PfkB domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZP46_OPITP
ribokinase-like domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ACB77532.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_87
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
102592..103374
|
3-oxoacyl-(Acyl-carrier-protein) reductase n=2 Tax=unclassified Opitutaceae RepID=H1IV78_9BACT
gluconate 5-dehydrogenase
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:AHF91478.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_88
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(103468..104748)
|
Major facilitator superfamily MFS_1 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZQ8_9SPHI
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EHQ27750.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
major facilitator superfamily protein
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_89
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
104937..105326
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ52_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58056.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_253396_90
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(105574..106026)
|
Single-stranded nucleic acid binding R3H domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJP1_9BACT
Single-stranded nucleic acid binding R3H domain protein {ECO:0000313|EMBL:EEF59917.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
single-stranded nucleic acid binding R3H domain-containing protein
|