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berkeley_reactor_200306_planktonic_scaffold_24546_39

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 73194..79109

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
YD repeat protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBW8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 1634.0
  • Bit_score: 948
  • Evalue 6.30e-273
YD repeat protein {ECO:0000313|EMBL:EDY16084.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 1634.0
  • Bit_score: 948
  • Evalue 8.80e-273
type IV secretion protein Rhs similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 1639.0
  • Bit_score: 872
  • Evalue 1.60e-250

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 5916
ATGACTTTGGATGACGAATATTCTGACGGAGAATTATATACCAATATTGTCGGGCTGATGCCTGCTTATTCGGGAGTCTGGTATTCCGGCGATGATTTCTGGCAGACGGTTGCCTATTCTGGAATTGCTGCATCGCATAAAGACGGGAAAACCCCATTTGGGGCAACGATTTCCGGTCAGGCTGAACTCCAAAAGATGAGCTACCGGTTTGAAATTCCGGGCTCGGAAATGTTTACGGAGTATCGCATAACGTGGGATTTGGTTACCTACGATGTTCCATTGGGACAGGTGATTAATATCGCTCATGGCCAAACAAATATCATTGGAAACGGAGCGGATTTGTTTACCGATGCTTTCGAAGAGCCGGCGCCGTGGTGGGACCAGAGCGATATTGGCGGTTATGTATTCACCTTTGTCAGCAATGTTCACGTTTCCAAAATCCAGCCGGGGACTTTTGCCGGTGCGGGCACGCCTGGAACCGGCCCCGGCTGGAGCGCGGGAACTGGCGGCAGTGGATGTTCCAGTTGCGGAGGCGGAGGGAATGGGGCGTTGGGCGGCAGTGGCAGCCCCTATGGAGGCATATATGCTGCCTTCAGTTTGGGGCGCGCCACGCCATACTTGTCTGCGGGTGAATTGAACTTGTGGTCACCCACACCCGTATCGGCTTTGTCCACTCCTGCCGCGCTTTCTCTGGCCACCGCAAATTCAGGTGTCGAAGTCATTGACGCTGGAAACCAGCTTCGCCAAATCAATGCGCCCCAGGCTCTGGCTGACATAGTGGTCAGTAACGCCTACGCTTACCGGATTAATTTCTATTTACCATCGCAAGTAGGAGCATTGGTTGGAGGCGTGCATCAGCTCACGGGCACTCCCTTTATCACCTGGTTGATCAGCAATCCAGATGGCGCCAGTGCGACGAATCGGCTGCAATTCACCAAAATCGAGGGCTCCGACGTTAGCGTTTTTGAAGCCGACTACACAGCTTCCACCGGCACATGGAAATTTGAATATCCAGGAGGGCTTCACGAAGACGAGGTGCAGACCTTTCAATCAACGAATGAACTCGGCCTGTTAACCACTGTCACCACCACCACTCGAGTGCCGGGGGGCCCTGATCAATACAAGGTTCGCCGCATTTATCAAATGTATTGTCCGGACCAATGGACGGTTCCCCAAGGCCCGTATTTGGTGGAAGAAACGCTGGACCCTGATAATCATCCGAGAACCACAACCTACACGTATAATTGGGGAAGTTACGCCAATGGAACGACCATTCCGTTGCAGTCTGTTGTTTATCCCGATGGCTCCTGGAAACGGTATGATAGCTTTGATGCTCAAGGGCGGCCTGGGGTCATTTATTCCCCGCAACAGAATACGACACTTGCCAATTATGGGTCCCAGCCAACCGATCTCGAATATCACTGGTATGATCCAGGCTATGTCTATGGCTCTGGCGATGACGGCTCTGTCAGTCCGAATACACCACGTATGATCGAGAGAGACATAAACGGACTTCAAAGTTTCACCTTTACAGCTTTTCCCTCGCAGTATGAACGATTGGACATTGTTTGTCCGGGATCTGGTTATTATTCCTGGGATGATTCGCAGAACCTCGTGACCACAACGATGTATTATTCAACCGGGCCGAACACGAATCGCGTGCAAAGTGTTTTGCATCCAGACGGCACTATGCAGATTTACGACTATGCCCAGGCTGCCGATGGCAGTGAAACCAACACCGTTTATTCCGGCGTGCCTAATGCCGGCCACACCACCATTGTGGACGGCACCAAAACCATAACCATTCTCGGCCCGGTTGGGCAGATGATCTCGAAGACGGTGCTCGATATTGCCTCTGACATCACGCTTTCGAGCGAGATTTATGGTGAGTATGATGAATACAGCCGGCCGCAATGCGTGACCTATCTGGATGGCACTTCCAATATCACCGCTTACGCCTGCTGCGGCGTGGATTTCACCATTGACCGCGATGGCGCCGTGACGCAATACCACTATGATGCCGATAAACGGCAGGTGGCCACCACCCGCTTGGGTGTCACCACATCCAATATATTGGACTCGGTTGGCCACGTCTTGAAGACGGTTCGCATCGGTTCCGACAACTCGGTCATCACGTTGAGCCAATCCCAATACGATCTTTCCGGCCAGTTGATTGCCGAGACAAATGCCCTCAATGGCGTGACAACTTATAGCGAATCAACCAACAGCATTGGCGGGCTCATTCGCACTACCACCTATCCGGACGGTGGCACCCGAATTGAGGAATATAATCTGGATCAATCGTTGGCCAGCGTTACCGGCACCGCGGTGCATGGCCAGGTTTACGGTTATGGCAGCGAGACTGCCCAGGATGCAAACATGAATTGCGGCTACACAGTGATAACCAATCTGGACCAGAACGGGAATCCGACCACCGAATGGACCAAGACCTATTCAGATCTATCCGGCCGCGTGATTGAGACCTGCTATCCGGGCGATGGGTATTACGATGCGAATTGGAATTATTACTACCAGCCAAACAGCCGTTCCTACTACAATACCGCCGGCCAGCTCTGGAAGAGCATAGACCCGGATGGGGTGACGACGTTCAACGTTTACAACGCGCGGGGAGAAGTGGCCTATGCCATCCAGGCAGTGGATGACAACACCCGAAGCATTGCTGATTACTCAACGTTAACGAACAGTTTGTCGGGCATTTTGAGCGGCGTGGACCGCGTTACCATGACCACCAATGACGTCATTTGGGACCATGGGATGAATGTGCGCCGCACGCGAACGTATGTCTGGCTCGACGGCCAAAGCAGCGGCACGCTGGCGTCGGTTTCGGAAAATTCAACGGACGGCCTCAAATCATGGCAGGTCACGTATGCCAGTTCCAGTATCGCGGTGACAAATCAGACTGTCACCAGCTATTCCGGCACCAGCCGCTCCGTCATCAGCACCGCGCCGGACGGTTCCTATGCCATCAACACCTATGTCTCCGGCCAGTTGATTTCCAGCACGCGGTATGATTCCACCGGCGCTCAAATTGGCGGCACCACCTACGCTTATGACGCCCACGGGCGGCAATATCAAGTGACCAATGCCCGCAATGGCACCACCACCTATGGCTACAACAACGCCGACCAGGTTACCACCGTCACCACACCCAATCCGGGGAATGGCGGATCGGCCGAAATCACCACCACGCTTTACGACAACATGCTCCGGCCTTACAGCGTCATTCAGCCCGACAGCACCACTGTCAACACCGTCTATCTGCTCACGGGCGAACTGGGCCTGCAATACGGCTCGCGCACCTACCCGGTGGGTTATAGCTACGATTACGCCGGGCGGATGCAAAGCATAACGAATTGGAGCAACTTTACCAGCCTCACCGGTGCGCGCGTAACCACCTGGAACTACGATGACGAGCGCGGCTGGCTTACGAATAAAGTCTATGATGACAGTCATGGGCCTTCCTACACCTACACTCCCGGCGGACGACTGCAAACCCGCGCCTGGGTGCGCACCGATGCCAACGGCAATCCCATCACGACCACCAATAATTACGACTACACCGGAAGCCTGACGAATGTGTGTTATTCCGATTCGACGCCGGCCGTCACCAACAGTTATGACCGGCTGGGACGTTTAAGTTCGGTCGTCTGCAACGGCATGACGGACACCCTGACCTATAATCTGGCCGGAGCATTGCTCGGTGAATCCTACTCCGGCGGCGTGCTGAATGGTCTGGCGGTGACCAATGGGTATGACCAGTTTATGCGCCGCACAAAACTGTCCGCCCTGTCCGCCGGTTCCCAGCTCACGGCTGCCAATTATGGCTACGACGAGGCTTCGCGATTATCCACCGTGGATGACAACAACGGCAATACGGCGACTTATAGTTACCTTGCAAATTCGCCGTTGGTGAACCAGATTACCTTCAAGCACAATGGCACAACGCGGATGACGACGACCAAGCAATATGATTACCTGAACCGGCTGACGCAGATTTCGTCCATCGGCGGGGCGAGCTCCGCGAGGCCCATTTCTTTCAACTACACCTACAACCCGGCGAATCAGCGCACCAAGGACACGCTGGTGGATGGCAGCTACTGGGTTTACCAGTATGATTCCTTGGGCCAGGTGACCAGCGGCAAAAAATACTGGCCCGATGGCACGCCGGTGGCAGGACAGCAGTTTGGCTATGCCTTTGACGACATTGGCAACCGGACGCAGACCCAGAGCGGTGGCGACCAGACGGGTGGAAACCTGCGCACGGCCAATTACAGCGCCAATAATCTCAACCAGATCACCCGCCGGGATTATCCGGGCACGAATGACATTGTAGGCGTGGCATTGGCAACGAACAGCGTGACCGTGAACGGGCAACTGGCGTATCGCCACGGCGAATATTTCTGGGCAACGGTGCAGACCAACAACATTGCTGCGCCCCAGTGGCAGGACGTGACGGTGGCCAGTGGTGGCGCCACCAATAAGGGAGGCATGTATGTGCCGCAAACCCCGGAGCAATTCCATTACGATGCGGATGGGAATCTGACCAATGATGGCCGCTGGAATTACACATGGGATGCGGAAAATCGCTTAATCCAGATGACGGTCAACACGAATGTCGGGCCGCAGTATCAACTGACGTTTGCTTATGACTCAATAGGCCGGCGGATCAATAAAATTGTGTCTGAAAATGGCATGCCAGTCAGCACGAGCAGATTTTTGTATGACGATTGGAGTTTGATCGCCAAGCTCAATCCCCAATCATCCCTCCTTAAATCGTTTATGTGGGGAACGGACTTGTCAGGTTCGATGCTGGGAGCGGGTGGAGTTGGCGGGTTGTTGGAGGTGAGCGATTATGAAGGCGGCACGACGAATTGTTTTCCTGCCTTTGATGGCAATGGCAATGTGATGGCGTTAGTTAATGCGAACGACGGGATGACTGTCGCTAGTTATGATTACGGGCCTTTTGGGGAGACGATTCGCATGACCGGCACAATGGCTGAAGCTAATCCGTTCAGGTTTTCAACTAAATATCAGGATGATGAATCCGACCTGCTTTATTATGGGTATAGATATTACATACCGTTAAGTGGGGCATGGACAAGTCGTGACATAATTGAAGAACAAGGTGGATTTAATATCTATGAATTTTTCAATAATAACACGATATCATATTATGATGCTTTCGGATTGGATGGTGCTTCTATAGTTTTGAATGCTTTCAAAAATATCCGTCAAGAGTTATCAGATTCGACTGCTGCTACTACTACTGGATATAAAATTGCTTTAAGTCGGCTAGCGCATGTTCTGCCTTTGATTAAAGTTGTGTATGGTAAAACAGGAAAGGATGCAGCTGCTCAATATGATCCTAGCACAAAAACAATCACCTTAGGGAAAGACTCAGGCGACTTTACTATCCTTCACGAAATGGTTCACGCTTGGAACGATAATCGGCCATCAGGGCTTACGGTGCCTCGGCTGGATGAAGGGATGGCATATGCGTTTGAAGAAGGAATGCGACTCGCAGTTGTTGATGGTATTGCAGTCACGGAAAGGTCGTTGCGTGCAGATAATAGCCCTTGTCGTTTAGACTATCTCCAAAGGCTTTGGAGAGGATATTGGGAAAATAAAGCGTGGCCAGATCAATACCCAGGCGGCACATATTACGAATATATATGGTCGAGTGGAACGGATTTTAAGCTTGATATGCCCGACTTTTGGAATGTTGAAAAAAGGCTCGGTTTTAGCATTAGTTGTGATAAATTTGCAGGCGCATTGAATACAATACTGGAATCAAAAGGTTGTTGTTATAGATTTACGTGCAACAATGATGATGCGAATCCGAATCATATCACTCCAGGCAAGTTGATTAGCCCTGCTTTTAGGAGTTTTCAATGA
PROTEIN sequence
Length: 1972
MTLDDEYSDGELYTNIVGLMPAYSGVWYSGDDFWQTVAYSGIAASHKDGKTPFGATISGQAELQKMSYRFEIPGSEMFTEYRITWDLVTYDVPLGQVINIAHGQTNIIGNGADLFTDAFEEPAPWWDQSDIGGYVFTFVSNVHVSKIQPGTFAGAGTPGTGPGWSAGTGGSGCSSCGGGGNGALGGSGSPYGGIYAAFSLGRATPYLSAGELNLWSPTPVSALSTPAALSLATANSGVEVIDAGNQLRQINAPQALADIVVSNAYAYRINFYLPSQVGALVGGVHQLTGTPFITWLISNPDGASATNRLQFTKIEGSDVSVFEADYTASTGTWKFEYPGGLHEDEVQTFQSTNELGLLTTVTTTTRVPGGPDQYKVRRIYQMYCPDQWTVPQGPYLVEETLDPDNHPRTTTYTYNWGSYANGTTIPLQSVVYPDGSWKRYDSFDAQGRPGVIYSPQQNTTLANYGSQPTDLEYHWYDPGYVYGSGDDGSVSPNTPRMIERDINGLQSFTFTAFPSQYERLDIVCPGSGYYSWDDSQNLVTTTMYYSTGPNTNRVQSVLHPDGTMQIYDYAQAADGSETNTVYSGVPNAGHTTIVDGTKTITILGPVGQMISKTVLDIASDITLSSEIYGEYDEYSRPQCVTYLDGTSNITAYACCGVDFTIDRDGAVTQYHYDADKRQVATTRLGVTTSNILDSVGHVLKTVRIGSDNSVITLSQSQYDLSGQLIAETNALNGVTTYSESTNSIGGLIRTTTYPDGGTRIEEYNLDQSLASVTGTAVHGQVYGYGSETAQDANMNCGYTVITNLDQNGNPTTEWTKTYSDLSGRVIETCYPGDGYYDANWNYYYQPNSRSYYNTAGQLWKSIDPDGVTTFNVYNARGEVAYAIQAVDDNTRSIADYSTLTNSLSGILSGVDRVTMTTNDVIWDHGMNVRRTRTYVWLDGQSSGTLASVSENSTDGLKSWQVTYASSSIAVTNQTVTSYSGTSRSVISTAPDGSYAINTYVSGQLISSTRYDSTGAQIGGTTYAYDAHGRQYQVTNARNGTTTYGYNNADQVTTVTTPNPGNGGSAEITTTLYDNMLRPYSVIQPDSTTVNTVYLLTGELGLQYGSRTYPVGYSYDYAGRMQSITNWSNFTSLTGARVTTWNYDDERGWLTNKVYDDSHGPSYTYTPGGRLQTRAWVRTDANGNPITTTNNYDYTGSLTNVCYSDSTPAVTNSYDRLGRLSSVVCNGMTDTLTYNLAGALLGESYSGGVLNGLAVTNGYDQFMRRTKLSALSAGSQLTAANYGYDEASRLSTVDDNNGNTATYSYLANSPLVNQITFKHNGTTRMTTTKQYDYLNRLTQISSIGGASSARPISFNYTYNPANQRTKDTLVDGSYWVYQYDSLGQVTSGKKYWPDGTPVAGQQFGYAFDDIGNRTQTQSGGDQTGGNLRTANYSANNLNQITRRDYPGTNDIVGVALATNSVTVNGQLAYRHGEYFWATVQTNNIAAPQWQDVTVASGGATNKGGMYVPQTPEQFHYDADGNLTNDGRWNYTWDAENRLIQMTVNTNVGPQYQLTFAYDSIGRRINKIVSENGMPVSTSRFLYDDWSLIAKLNPQSSLLKSFMWGTDLSGSMLGAGGVGGLLEVSDYEGGTTNCFPAFDGNGNVMALVNANDGMTVASYDYGPFGETIRMTGTMAEANPFRFSTKYQDDESDLLYYGYRYYIPLSGAWTSRDIIEEQGGFNIYEFFNNNTISYYDAFGLDGASIVLNAFKNIRQELSDSTAATTTGYKIALSRLAHVLPLIKVVYGKTGKDAAAQYDPSTKTITLGKDSGDFTILHEMVHAWNDNRPSGLTVPRLDEGMAYAFEEGMRLAVVDGIAVTERSLRADNSPCRLDYLQRLWRGYWENKAWPDQYPGGTYYEYIWSSGTDFKLDMPDFWNVEKRLGFSISCDKFAGALNTILESKGCCYRFTCNNDDANPNHITPGKLISPAFRSFQ*