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berkeley_reactor_200306_planktonic_scaffold_30796_75

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(117316..120456)

Top 3 Functional Annotations

Value Algorithm Source
pectin lyase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B65E8D similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 1039.0
  • Bit_score: 1090
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 1058.0
  • Bit_score: 1051
  • Evalue 0.0
Uncharacterized protein {ECO:0000313|EMBL:ACT93373.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 1058.0
  • Bit_score: 1051
  • Evalue 0.0

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3141
GTGAAAAATCAATTTATCGCTAAAACCGCGTTCCTTCCCTGGCTGGCCGGTGTGCTGGCTGCCGTAGGGTTGGCCGCGCACGCCGGTCCGCCGCCGCCGGTTCCGATTATTTCCTTTAAACAGGGCCATTTGGTTTACGACCAAGACGCCAACGGGAACCGGGTGCCGGATTTCTCCACCTGCGGTTATGCCGGCGGCGATCGGCCGATTCCGGACGCGCCGGTTCGCGTGGTCGTCTCGCCGGTTCAGGGCGATGAAACCGCGCGCATCCAAAGAGCGATAGATTACGTGGCCGGCTTGCCGGCGGATACGCATGGCGTGCGCGGCGCGGTTTTGCTGCTGCGCGGCCGGCACGAGGTTTGGGGGCAATTGCAACTCACCAATTCCGGCGTCGTCTTGCGCGGGCAGGGGATGAATGAGCAGGGAACGGTTTTGGTGGCGGCCGGAATTGACCGGCGCACGCTGATCCGAATTTCCGGGGAGAACGATCTGTCCGTCCGCACCAACGCCGGCTGGAACATTGCCGACCGTTATGTGCCGGTCGGCGCAACGAGCTTTCAGGTCGGGAACGCGGATGGGTTGAAGACCGGCGACACCATTCGCATCACGCGTCCGAGCACGCGGGCGTGGATTGACGATTTGGGCATGAACGATTTTGGCGGCGGCGATGGCGACTGGCGGTTGGTCTGGCATCCCGGCAGTTACGATCTGGTTTGGGATCGGGTGATTCAGAAAATTGACGGCAACCGGATTACGCTTGATTCGCCCATCACCACGGCCATGGAAACGAAGTATGGCGGGGGCGCCGTGGCGACGTATGCCTGGCCGGGCCGCCTGCATGAAGTTGGCGTTGAGAATTTCCGCCTCGAATCCACTTTTGATGCGAACAATCCCAAGGACGAAAATCATGCCTGGTTTGCCATCACCTTGGAGAACGCGATGGACGCCTGGGTGCGGCAAGTCGCCTTCGAGCATTTTGCCGGTTCGGCGGTGGCGGTTTATGAAACCTGCAAACGCGTGACGGTGGAGGATTGTCTTTCCCGCGATCCCGTTTCCGAAATCGGCGGCTGGCGGCGGAACACGTATTTCACCCAGGGACAACAGACCTTGTTTTTGCGCTGTTGGGCGGAGCATGGCCGGCATGACTTTGCCACCGGCTTTTGCGCGGCCGGGCCCAACGCCTTCGTGCAATGCGAAGACACGCTCCCGACCGCCGACAGCGGCGGCGTTCAGAGCTGGTCCAGCGGCACCTTGTTTGACAACGTGCGCCTTGACGGCGGCACGTTGAGCCTGAAAGACCGTGGCTACACCGGCGAAGGCGCGGGCTGGGCGGCGGCCAACTCGGTTTTGTGGCAGTGCGATGCGGCGGTGATTGCCTGCGAAAATCCGCCGACCGCGCAGAATTGGGCGTTCGGCTCCTGGGCGGAATTCGCTGGGAACGGCATCTGGCGTTCCTCCAACGAACACATTCGCCCGGCCAGTCTTTTCCTTGCGCAGGTGGCCGACCGGCTCGGCGAATCCGCCGCAGCCCGCATCAAGCTGATGTCGCGTTCGCAGGATGAATACAGCAATCCCACCAGGCAACAGGCCCGGGAATTGATGGCGGCTTCGCGCCGACCGGCGCCGCAGTTGGCTGACTTCATCGCGGCCGCGGCGGAGCGGAATCCGATTCCGAGCGAACCGGGCGCTGCGAAATCCGTGGATGACTTGCCGGCCCCGCGCAACGCATCGCCCGTCGCGTCTCACCTCATTTCGATCACGAACGGCTGGCTGGTTTGCGACGGAAAATTATTGACCGGCTCGACCGCCAGCATCAACTGGTGGCGCGGCAACATGCGCCCCAGCGAAGCGGGAAAATACGGAATCAATCTGAGCCGCTTCGCGCCGGGACGCAGCGGGCCGGGGTTCACCGATGATTTAAACGGCCTCGCCAACAACTTGATCGCTTCCAACCAGGTCGCGCTCGATCATCATTATGGCCTCTGGTATGACCGGCGTCGTGAAGATCACGAGCGCGTGCGGCGGATGACCGGCAATGTCTGGGCCCCGTTTTACGAGCAGCCTTTCGCGCGCAGCGGGCAGGGGACGGCGTGGGACGGTTTGAGCCAGTATGATCTCACGCGATATAATCCGTGGTATTGGTCGCGGCTGGATGAGTTTGCCAAAATCTGCGACGCCCGCGGCCTGGTGTTGTTCAACGAAAACTATTTTCAGCACAACATCCTGGAAGCCGGCGCGCATTGGGTGGATTGTCCCTGGCGCACGGCGAACAACATCAATCACACGGAATTTCCCGAGCCGCCGCCGTTCGCCGGCGACAAGCGCATTTTCATGGCGGAACAATTTTACGACACGAACAACGCGGTTCGTCGCCGGCTGCACGCGGCTTTCATCCGGCAGAATTTGAACAACTTCACCAACGTCCAGAATGTCATTCAATTCACCAGCGCGGAATTCACCGGGCCGCTGGCGTTTGAACAATTCTGGCTGGACACCATCGGCGATTGGGAACGCAAAACCGGTCGCAAGGAATTGATCGCCCTGAGTTGCCCGAAGGATGTGCAGGACGCGATTCTCGCCGACCCGCAACGTAATCCCATCGTGAACGTGATTTGTTTCCGCTACTGGTGGCAGACGGACAAGGGATTGTTCGCGCCGAAAGGCGGACAAAATCTGTCGCCGCGCCAGTTCGAGCGCCAATGGCACGGCGGATCGCCCGACGACGAAAATCTGGCGGCGATGGCGGCGGAATATCGTCCGCGCTTTCCGGACAAAGCGGTGATTGCCTCCGGCGAAGACGCGCGGTTGCGCGGCACATGGGCCTTCCTGTGCGCCGGCGGTTCCCTGCCGGATTTGCCAAAAACCGCCGATGCTCGTTTGCTCACCGCGATTCCGCAAATGCAACCGTGGCAGGAAAATTCAGGGCAGCGTCGGTGGGCGTTGCGTGAACCGGGTAAACAGATGTTGATATATTCCGGTCGCGGCGCGCCAGTGGCGTTGGATTTATCGAAGGAATCAGGAACCTTTCGCGTAAATGTCGTCAACGAACGGACCGGCCAGATCACCCAAGGTGAAACCGTGAAAGCGGGCGGAACAGTGGAACTGCCCAAGGCGCCGGTGATTTGGTTGACGAAAGAATGA
PROTEIN sequence
Length: 1047
VKNQFIAKTAFLPWLAGVLAAVGLAAHAGPPPPVPIISFKQGHLVYDQDANGNRVPDFSTCGYAGGDRPIPDAPVRVVVSPVQGDETARIQRAIDYVAGLPADTHGVRGAVLLLRGRHEVWGQLQLTNSGVVLRGQGMNEQGTVLVAAGIDRRTLIRISGENDLSVRTNAGWNIADRYVPVGATSFQVGNADGLKTGDTIRITRPSTRAWIDDLGMNDFGGGDGDWRLVWHPGSYDLVWDRVIQKIDGNRITLDSPITTAMETKYGGGAVATYAWPGRLHEVGVENFRLESTFDANNPKDENHAWFAITLENAMDAWVRQVAFEHFAGSAVAVYETCKRVTVEDCLSRDPVSEIGGWRRNTYFTQGQQTLFLRCWAEHGRHDFATGFCAAGPNAFVQCEDTLPTADSGGVQSWSSGTLFDNVRLDGGTLSLKDRGYTGEGAGWAAANSVLWQCDAAVIACENPPTAQNWAFGSWAEFAGNGIWRSSNEHIRPASLFLAQVADRLGESAAARIKLMSRSQDEYSNPTRQQARELMAASRRPAPQLADFIAAAAERNPIPSEPGAAKSVDDLPAPRNASPVASHLISITNGWLVCDGKLLTGSTASINWWRGNMRPSEAGKYGINLSRFAPGRSGPGFTDDLNGLANNLIASNQVALDHHYGLWYDRRREDHERVRRMTGNVWAPFYEQPFARSGQGTAWDGLSQYDLTRYNPWYWSRLDEFAKICDARGLVLFNENYFQHNILEAGAHWVDCPWRTANNINHTEFPEPPPFAGDKRIFMAEQFYDTNNAVRRRLHAAFIRQNLNNFTNVQNVIQFTSAEFTGPLAFEQFWLDTIGDWERKTGRKELIALSCPKDVQDAILADPQRNPIVNVICFRYWWQTDKGLFAPKGGQNLSPRQFERQWHGGSPDDENLAAMAAEYRPRFPDKAVIASGEDARLRGTWAFLCAGGSLPDLPKTADARLLTAIPQMQPWQENSGQRRWALREPGKQMLIYSGRGAPVALDLSKESGTFRVNVVNERTGQITQGETVKAGGTVELPKAPVIWLTKE*