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berkeley_reactor_200306_planktonic_scaffold_23420_56

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(60941..62317)

Top 3 Functional Annotations

Value Algorithm Source
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 458.0
  • Bit_score: 674
  • Evalue 5.70e-191
pyrC; dihydroorotase (EC:3.5.2.3) similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 469.0
  • Bit_score: 399
  • Evalue 9.30e-109
Dihydroorotase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKV9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 458.0
  • Bit_score: 674
  • Evalue 4.10e-191

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1377
ATGAATTCGCTGCTTCTCACCGGCGGTCGCGTGGTGGATCCCGCCAACCAATTTGATTCCGTCGCCGACGTGCTCATTCTCGACGGCAAAATCGCCGCCGTGGGCACCGGCCTTTCCGCGCCGGCGCAAGTGGAAACCTTGGATGCGAAAGGCAAAATTGTCTCGCCCGGCCTCATTGATCTGCACGTGCATTTCCGCGAACCCGGCCAGACGGCCAAGGAAAACATCGCGACCGGTTCGGCGGCCGCGGCGCGGGGCGGTTTCACCTCCGTGGTCTGCATGCCGAACACGTCGCCCGCGATTGACAGTGCGGCAACTGTGGCGCTCATTCATGAACAGGCCGGCGCTCAGGGACTGGTGAATGTCTTTGTCAGCGGCGCGATCACCCGGAATATTGCCGGCGAGGAACTCGCGCCCATCGGCGGTTTGAAAAAGGCCGGCGTGGTGGCCATCACGGACGATGGACGCTGCATTCAAAACCACGAACTGATGCGGCGTGCCTGCGAATACGCCAGAATGTTCGATCTGCCGGTGTTCGACCACTGCCAGGATTATTCGCTCGTCACCGACGGGGTGATGCACGAAGGTTATTGGAACGTGGCGCTGGGCCTGCGCGGCTGGCCGGCGGCGGGCGAGGAAATGATCGTGGCCCGCAACATCCTGCTGGCCGAATTGACCGGCGCCAAAATTCATTGCCAGCACCTGAGCGCCGCCGGGAGCGTGGCTCTGATACGCGACGCCAAAAAGCGCGGTGTCTCCATTTCCGGTGAGGCGTGCGCCCACCATTTCACGTTGACCGATGCGGCCATCGCCGGCAGTGAAAAATTCTGGGCCCATGACGGCCAGTCACTCGCCGCCACCCAGGGCGCCGACCTCCCGCAATGGCCGGCTTACGACACGCATTTCAAGATGAATCCCCCGCTGCGTTCCGCCCGGGACCGCGAGGCCATCCTGGAAGGTCTGGCCGATGGAACCATCGAAATCTTGTGCAGCGACCACGCGCCGCATTGCGATTACGAGAAGGCCGTGGAATTCGATTACGCGCCGTTCGGTATCACCGGTCTGGAAACGGAGCTGGCGTTGTCGCTGATGCAACTCGTCCATACCAAACGCATTGCGCTGGTGGATTTGATTGCGAAATACACGGTGAACCCGGCGCGGTTGTTGAATTTGAAAAAGGGCACGCTGAGTGCCGGCGCGGACGCGGATGTCACCGTTTTTGACCCGGACGCCGAATGGGTGTATCGTTCCCCGGATTCCGCCAGCAAGTCCCGGAACAGTCCGTTTTTCGGGTGGAAGCTGCGAGGCAAAGTTGCCGCCACGATTGTGGGCGGCAAAAAAATATTCGCCGCAGCGGCAGAACTGGCGGCAGTCTGA
PROTEIN sequence
Length: 459
MNSLLLTGGRVVDPANQFDSVADVLILDGKIAAVGTGLSAPAQVETLDAKGKIVSPGLIDLHVHFREPGQTAKENIATGSAAAARGGFTSVVCMPNTSPAIDSAATVALIHEQAGAQGLVNVFVSGAITRNIAGEELAPIGGLKKAGVVAITDDGRCIQNHELMRRACEYARMFDLPVFDHCQDYSLVTDGVMHEGYWNVALGLRGWPAAGEEMIVARNILLAELTGAKIHCQHLSAAGSVALIRDAKKRGVSISGEACAHHFTLTDAAIAGSEKFWAHDGQSLAATQGADLPQWPAYDTHFKMNPPLRSARDREAILEGLADGTIEILCSDHAPHCDYEKAVEFDYAPFGITGLETELALSLMQLVHTKRIALVDLIAKYTVNPARLLNLKKGTLSAGADADVTVFDPDAEWVYRSPDSASKSRNSPFFGWKLRGKVAATIVGGKKIFAAAAELAAV*