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berkeley_reactor_200306_planktonic_scaffold_23420_76

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 83017..83823

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003820FF0 similarity UNIREF
DB: UNIREF100
  • Identity: 36.6
  • Coverage: 268.0
  • Bit_score: 157
  • Evalue 9.80e-36
Uncharacterized protein {ECO:0000313|EMBL:EEF60158.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.8
  • Coverage: 261.0
  • Bit_score: 125
  • Evalue 9.80e-26
prepilin-type N-terminal cleavage/methylation domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 28.2
  • Coverage: 305.0
  • Bit_score: 81
  • Evalue 3.30e-13

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 807
ATGAAAAAAATGTCTGCTTCGGTCCCTTCGCGCAAGGGATTCACTTTGATTGAGTTGCTCGTGGTCATTGCGATCATCGCCATTTTGGCCGCGATGTTGCTCCCGGCTCTGGCCGCCGCCAAGGAGAAGGCCAAGCGAGTTCAGTGTTTGAATAATGTGCATCAAATTGAAATTGCGATGAACATCTATGCCGGTCAGTTCGGCGATAAGTTGCCACAATTTACTGATAGAACAGGAGCCTGGGCTTGGGATTTGCCAACCGAGGTGGCGGATATCATGTTAACTTCCGGATTGACCAAGAAGGCGATGTATGATCCCGGCACGGAGCCAAAGTTTGGTGACTACGAAAATTTTATGGGACCCGGCCATCTTGGCGCTACTGATGCGTCACTTTGGAATTATGATGACAAAGGCAATTTTCACATTATTGGCTATGCGCTGGCTATCAATGAACTGAACCCGAAACCGCCATATAATAATTTGGGATTTTTGGACGTTACCAATCAGAATAAAACTCTGCAGCCGGAATCTATTACCATGGCTGGAAAAACTTTTCTGGTCCCAGTATCCGATCGCGTATTGATCGCGGACGCTGTGATTAGTGTCAACCGTAACATGCCGTTTACCCGGGCGGATAACAATTTTTCGGATATTACCGGTGGTTTTCATCTTCATCATTTGAGCCCGCATTTGAAAAACAACATTCCCACTGGAGGCAGCGCCGGATTCAAAGATGGCCACGCAGAATGGCACAAGTTCAATGAAATGGTTCCGCGCACAGATGGCGGCGCGGTTTTTTGGTGGTAA
PROTEIN sequence
Length: 269
MKKMSASVPSRKGFTLIELLVVIAIIAILAAMLLPALAAAKEKAKRVQCLNNVHQIEIAMNIYAGQFGDKLPQFTDRTGAWAWDLPTEVADIMLTSGLTKKAMYDPGTEPKFGDYENFMGPGHLGATDASLWNYDDKGNFHIIGYALAINELNPKPPYNNLGFLDVTNQNKTLQPESITMAGKTFLVPVSDRVLIADAVISVNRNMPFTRADNNFSDITGGFHLHHLSPHLKNNIPTGGSAGFKDGHAEWHKFNEMVPRTDGGAVFWW*