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berkeley_reactor_200306_planktonic_scaffold_23420_109

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 113818..115746

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilM n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEZ8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 649.0
  • Bit_score: 806
  • Evalue 1.30e-230
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:EEF61496.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 649.0
  • Bit_score: 806
  • Evalue 1.80e-230
cell division protein FtsA similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 451.0
  • Bit_score: 255
  • Evalue 4.00e-65

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1929
ATGCTGAACACAAAGTCATTTTTGACCGTAGATTTCGGGGCTGGCAGTCTGAAACTGGCAGAGTTTGAAATCAATGAGGCGGGTGGATTGCAGTTGGACAGTTTTGTAATCAAACCGCTCGGATTGGAAGGTTCACAGGAGAGCACACGGGAAAAGATCATTTCGCAGGCGCTGCAAGAAGTGCTGGCGGAAAAAGGTCTGAAATCCAAAACCGTGAATGTCTGTGCGCCCGGCTTCCATGTGTTTTCCAAATTTGTCAAACTCCCGCCGGTGGATGCCGGCAAGGTGGGGCAGATCATTCAATACGAGGCCCAGCAAAACGTTCCCTTTCCGCTGGCGGAAGTGGTCTGGGATTACCAGATCCTCGGCTCGGCGGCCGGCGGCGAACTGGAAGTGCTGCTCGTGGCCATCAAGTCGGACATTGTCGAAGGGTTGTTCCGGGTGGCGGACGAGGCCAAGTTGAGCCTCCAGTTGTGCGACGCGTCGCCGGCGGCGCTGTGCAACGCGTTCCGCTATAATTATCCCGAGCTGGAAGACTGCACCATGCTGCTGGACATCGGCGCCAAGACCAGCAATCTGCTCTTCTTTGAAAAAGGCAAGGTTTTCTCCCGCAGCATCAATCTCGGCGCCAACACCATCACCCAGGACTTTGCCAACGAATCGAAGTTGAAATTTCCCGAAGCGGAAAAACTCAAGATTGCCGAAGGTTTCGTCAGCCTGGGCGGCGCGTATGAGGAGCCGGAGAATCCGCATCAGGCGGCGATTTCCAAGATTGCGCGCCAGTTCATGACCAAACTGCACATTCAGGTCAACCAAACCATGCAGTTTTACCGCGGCCAGCAGGGCGGCTCCGCGCCGCAACGGCTGTTCCTTTCCGGCGGCGCCTCCATCATGCCCTACACGGCGCAGTTTTTTGCGGAAAAACTGAATGTGCCGGTGGAATACTTCAATCCGTTCCGCAACGTGCTGATCAATCCGGCGCTCGATTTGGAAGAGTTGTCGCGGGTGGCGCATTCGCTTGGTGAAGTGGTCGGTCTGGGCCTGCGGAATCTGGCCAATTGCCCGGTGGAAATGAATCTGATGCCGGAAAGCACGTTGCGCTGGCAGTCGTTGAATCAGAAAAAGCCCTACTTCATCGCCACGGTTTTCAGTCTGGTGCTGGTGGCCTTCTGCGTCGGTTTCCTGTTCAAAAAGCTGGCGGTGAACAAAGAGGCGGAGATCGAAAAACTGGGCCCGACGGTCGCCGCGTTGAGCGCCAAGTCCCAACGGTTCAAAACCGAATACAACAAGCTGCAAAACCTGGAGTCGGAAGCCAGCCAGATCACCACGTGGATGCAGGACCGTTATTACTGGGGAGATTTTCTCTCGGACCTGCGGGCGGCCCTGATGCGCTCGGAAGACACCATGCGGAAAAAACTGGCCGCCCAGGCCCCGGGCGTGGATGTCGGCGTCTGGGTGGAGCAAATGATTGCCAATCCGAATTTGGGCTCCTCCTACGGCGGGCTGCCGGGCGCGCCAATCCCCGGCGGTGTTCCCGGCGGCATGCCGGGCGGACCGCCCGGTTATCCGGCTTCGCCTTATCAAGATGTGCCGGCCAACAACGGCTATGGCCGGACCGTTCCCGGCCAGTATCCGATGCCCGGCGCCGCAGCGCCGGCAACGCCCCCGGATGCCGGCGCGCCGGCGGACCAAAGCGGCACAACGACCGCCACCAATTATATCACCCTCGTTTGCCGGGCGGTGAACCTGACTGCGGTGGATCCGTCCGCGAACAGCGAAATTGCCTATGCGGTGGAAAATCAAATCAAGAACTCCCCGCTGGTGGATCCCAAGGCGACTCACTTAACGGGGCAGATAACCACCGATGATTCCAATGGCACGTTCACGTTTATCTTGGACGTTGTGCCGGTCAACCCGCTGAAGTTTTGA
PROTEIN sequence
Length: 643
MLNTKSFLTVDFGAGSLKLAEFEINEAGGLQLDSFVIKPLGLEGSQESTREKIISQALQEVLAEKGLKSKTVNVCAPGFHVFSKFVKLPPVDAGKVGQIIQYEAQQNVPFPLAEVVWDYQILGSAAGGELEVLLVAIKSDIVEGLFRVADEAKLSLQLCDASPAALCNAFRYNYPELEDCTMLLDIGAKTSNLLFFEKGKVFSRSINLGANTITQDFANESKLKFPEAEKLKIAEGFVSLGGAYEEPENPHQAAISKIARQFMTKLHIQVNQTMQFYRGQQGGSAPQRLFLSGGASIMPYTAQFFAEKLNVPVEYFNPFRNVLINPALDLEELSRVAHSLGEVVGLGLRNLANCPVEMNLMPESTLRWQSLNQKKPYFIATVFSLVLVAFCVGFLFKKLAVNKEAEIEKLGPTVAALSAKSQRFKTEYNKLQNLESEASQITTWMQDRYYWGDFLSDLRAALMRSEDTMRKKLAAQAPGVDVGVWVEQMIANPNLGSSYGGLPGAPIPGGVPGGMPGGPPGYPASPYQDVPANNGYGRTVPGQYPMPGAAAPATPPDAGAPADQSGTTTATNYITLVCRAVNLTAVDPSANSEIAYAVENQIKNSPLVDPKATHLTGQITTDDSNGTFTFILDVVPVNPLKF*