ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_23420_138

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 178241..178954

Top 3 Functional Annotations

Value Algorithm Source
CHAP domain./Lectin C-type domain n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4F0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 30.9
  • Coverage: 181.0
  • Bit_score: 82
  • Evalue 6.00e-13
Secreted protein containing C-type lectin domain protein {ECO:0000313|EMBL:KJU84923.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.6
  • Coverage: 135.0
  • Bit_score: 87
  • Evalue 2.00e-14
CHAP domain./Lectin C-type domain. similarity KEGG
DB: KEGG
  • Identity: 30.9
  • Coverage: 181.0
  • Bit_score: 82
  • Evalue 1.70e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Magnetobacterium bavaricum → Candidatus Magnetobacterium → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 714
ATGAAAAGCCGGGTAAAGCTTTATGTCGTCGGATTCAGTTTGATGGCCGGTGTTTTATCCGCCAACGCTTCCCTGCATTATTTTTCCGGAACCGGTCATTGGTATGAGCCGGTGTTGGTTCCCGGCGGCATTGAATGGCCGGACGCGAATGCCGCCGCAACGGCCCGGGGCGGCTATCTTTGCACCATTACCAACGCGAGCGAAAACACCTTTGTCGCCTCGCTCGTTGACGTCAGCTATTACAGTGACGTCAGTATTAACAGCGACATTCTCGGCCCGTGGCTGGGCGGATTTCGGCACGCCAATGAATCCCAGTGGCAATGGGTGACGGGCGAGCCGTTTACTTACACCGATTGGTATCCCGGCCAGCCGGATGGCTACGGCGGCACCGAACAGCGGCTGCAATTCTACGCCCGGGCCACCACGGGTTCGACCTGGGGCGATCATCCGGGCACGCCTATCACCGGCTATTCGCTGCCACGCGGCTACATCGTGGAGTATGACCACCCGCCGCTCTTCACGACGTTGAGCAACCAGGTGCTGACCATCTCCTGGCCGCAAACCACCAACAACTGGGTTTTGGAAACCACGCCCACGCTCAGCCATCCCCAATGGACGACCGCCAGCGTGCCGTTTCAGACCAATGCCAGCGGCCTTTTCATCAATGTCACCAATCCTGTCGGCACGGCCTTTTTTCGGCTGCGGTCCAACTGA
PROTEIN sequence
Length: 238
MKSRVKLYVVGFSLMAGVLSANASLHYFSGTGHWYEPVLVPGGIEWPDANAAATARGGYLCTITNASENTFVASLVDVSYYSDVSINSDILGPWLGGFRHANESQWQWVTGEPFTYTDWYPGQPDGYGGTEQRLQFYARATTGSTWGDHPGTPITGYSLPRGYIVEYDHPPLFTTLSNQVLTISWPQTTNNWVLETTPTLSHPQWTTASVPFQTNASGLFINVTNPVGTAFFRLRSN*