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berkeley_reactor_200306_planktonic_scaffold_23420_176

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(218761..220065)

Top 3 Functional Annotations

Value Algorithm Source
Homoserine dehydrogenase {ECO:0000313|EMBL:EEF62699.1}; EC=1.1.1.3 {ECO:0000313|EMBL:EEF62699.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 438.0
  • Bit_score: 613
  • Evalue 1.50e-172
homoserine dehydrogenase (EC:1.1.1.3) similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 440.0
  • Bit_score: 517
  • Evalue 2.20e-144
Homoserine dehydrogenase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XB14_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 438.0
  • Bit_score: 613
  • Evalue 1.10e-172

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1305
ATGCAGCAGGTCAACCTTGGCATCATCGGCGGCGGCACGGTCGGCGGCGGCGTTTACGAAGCGCTGCAACGCAACGGCCGGCTCCTCGCCTCCCGCATCGGCGCAAACGTGACAGTGCATCGCGTCGCCGTGCGCGAATTGAAGAAAAAGCGCGCCGTCCGTTTTCCCAAATCCCTGCTGACCACCGACTGGCGCCAGGTGGTTTTTGATCCGGAAATCCAGCTGGTGGCGGAGCTGGTCGGCGGCACCACCACGGCCCGGGAAATCGTTCTCGCCGCGCTCAAACTGGGCAAGCCCGTCGTCACCGCCAACAAGGCGCTGCTTTCCGCGCACGGCGAAGAATTGTTTGCCGCCGCCAAAAAATACGGCACCAACCTGTATTACGAGGCCAGCGTCTGTGGCGGCATTCCCATCATCAAATCGCTGCGCGAAGGTTTCGTGGGCAACCGCATCGAGGCGCTTTACGGCATCGTCAACGGCACCTGCAATTACATCCTCACGCGCATGAAGCTCGAAGGCGCGGACTTTGCCGGGGTGCTGGCCGACGCGCAAAAGCTGGGTTACGCCGAAACGCCGCCGGACCTGGACATTGACGGCCACGATTCCGCGCATAAAATCGGCATTCTCGCGTCGCTCGCGCACGGATTCTGGGTGAACCCAAAGAAAGTTTATGTGGAAGGCATTCGCCACATCACCGCCACCGACATCAAATATGCCGGCGAGCTCGGCTACACCATCAAGCTTATCGGCACGGTAAAAAAACTGGCAGACTCCTGCCGCGTGCAGGTTTCCGTGTTCCCCACGCTCGTGCCCAATGAACACGTGCTCGCCAGTGTGAACGGCGTGTTCAACGCGGTGTTTGTGCAGGGCGACATCGCGGGCGATTCGCTGTTCTACGGACGCGGCGCCGGCAAGGACGCCACGGCCAGTTCCGTGTTGAGCGACATCGGCGACGCCGTGCTGGATTTGAAAACCGGCATCAAGGACCGCCTGCCCGCCTTCGTGCCGCACGAATGTTCCGGCGCGGTGGCCTCGATTGATGAAGTGGTTTCGCAATACTTCGTCCGCCTCAACGTCGTGGACAAACCCGGCGTGCTGGCGAAGATCGCCACGATTTTTGGGCAGGCGAACATCGGCATCTCGTCCGTCATCCAGCCCGAAGGCGAGGAGGGCGAAAGTGTGCCGCTCATTTTCATGCTGCATTACGCGACCAATGGCACCGCGGCCAAGGCGCTCGCCAAAATCGCCAAATTGCCGACCGTGAAGGGCAAACCCGTGATGCTGCGCGTGGAAAGTTTCCAGTGA
PROTEIN sequence
Length: 435
MQQVNLGIIGGGTVGGGVYEALQRNGRLLASRIGANVTVHRVAVRELKKKRAVRFPKSLLTTDWRQVVFDPEIQLVAELVGGTTTAREIVLAALKLGKPVVTANKALLSAHGEELFAAAKKYGTNLYYEASVCGGIPIIKSLREGFVGNRIEALYGIVNGTCNYILTRMKLEGADFAGVLADAQKLGYAETPPDLDIDGHDSAHKIGILASLAHGFWVNPKKVYVEGIRHITATDIKYAGELGYTIKLIGTVKKLADSCRVQVSVFPTLVPNEHVLASVNGVFNAVFVQGDIAGDSLFYGRGAGKDATASSVLSDIGDAVLDLKTGIKDRLPAFVPHECSGAVASIDEVVSQYFVRLNVVDKPGVLAKIATIFGQANIGISSVIQPEGEEGESVPLIFMLHYATNGTAAKALAKIAKLPTVKGKPVMLRVESFQ*