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berkeley_reactor_200306_planktonic_scaffold_23420_241

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 287412..288377

Top 3 Functional Annotations

Value Algorithm Source
Transketolase central region n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRZ9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 320.0
  • Bit_score: 551
  • Evalue 3.60e-154
transketolase similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 324.0
  • Bit_score: 419
  • Evalue 4.70e-115
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 320.0
  • Bit_score: 566
  • Evalue 2.00e-158

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Taxonomy

RLO_Verrucomicrobia_64_8 → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 966
ATGAGTCTCACTTATCTCGAAGCCATCCGTGAAGCCCAGGCGCAGGCGTTGCGCGAAGATCCGCGTGTGTTCATTTACGGCCAGGACATCGCCGCTTTCGGCGGCGCCTTCAAGGCCACCAAGAATCTCGCCCGGGAATTTCCCGGCCGGGTGATGGACTCGCCCATCAGCGAGGACGCCATGGTGGGGCTGGCGGTCGGCGCCGCCATCGAGGGCATGCGGCCGATCGTGGAAATGCAATTCGCCGATTTTTCCACGGTGGGATTCAACCAGGTGGTCAATCAAGCCGCCACGCTGTTCTGGCGCACGAATGTTGCCTGTCCCATCACGGTGCGTCTGCCGTTCGGCGGCACCTCGGGCAGCGGGCCGTTCCACAGCCAGTGCATCGAGGCGATTTATGCGCATTACCCCGGATTGGTGGTGCTGACGCCGGCCACGGTGGAAGACGCCTATGCCATGTTGATCGCGGCGGTGGCGATTGATGACCCGGTGATTTTTTGCGAGCACAAATTCCTCTATTACCATCTGAAGGCGGAAAAGCTCCCCGTCGAAGCGCTGCCGGTGGGCAAGGCGCGCATCGCGCGGGAAGGCCGCGACCTGACGATTGTCACCTACAGCGCCATGGTCCACGAAGCGCTGGCCGCCGCCGGCGAACTGGCGGGCGAAGGATGGGAGATTGAAGTCGTGGATTTACGCTCGGTGAAACCGCTGGACACCGACACGGTCATCGCCAGCGTCGCGCGCACCGGCCGGTTGTTGTGCGTGGGGGAAGCCTGGCCCTGGGGCGGCGTGACGGCGGAGGTTATTGCCCGGGTCACGACCGACGGCTACGGCTTGCTCGATGCGCCGCCGCAGCGGCTCAACGCCAAGGACACCCCGGTGCCCTATCATCCCAACCTATGGGCCGCGCATCGCCCGACCGCCCGCAGCATTGCCGCCGCGGCCAGAAATTTATTGCGCCTGTGA
PROTEIN sequence
Length: 322
MSLTYLEAIREAQAQALREDPRVFIYGQDIAAFGGAFKATKNLAREFPGRVMDSPISEDAMVGLAVGAAIEGMRPIVEMQFADFSTVGFNQVVNQAATLFWRTNVACPITVRLPFGGTSGSGPFHSQCIEAIYAHYPGLVVLTPATVEDAYAMLIAAVAIDDPVIFCEHKFLYYHLKAEKLPVEALPVGKARIAREGRDLTIVTYSAMVHEALAAAGELAGEGWEIEVVDLRSVKPLDTDTVIASVARTGRLLCVGEAWPWGGVTAEVIARVTTDGYGLLDAPPQRLNAKDTPVPYHPNLWAAHRPTARSIAAAARNLLRL*