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berkeley_reactor_200306_planktonic_scaffold_23420_246

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(291572..292459)

Top 3 Functional Annotations

Value Algorithm Source
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 288.0
  • Bit_score: 479
  • Evalue 1.70e-132
Lipoyl synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XM87_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 288.0
  • Bit_score: 479
  • Evalue 1.20e-132
lipoyl synthase similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 286.0
  • Bit_score: 320
  • Evalue 2.70e-85

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 888
ATGACGACGACTGAATTGAAACCGCGTCCGCGTTTGCCGGAATGGCTGCGCATCAAACTGCCCACCTCCGACAGCTTCGCGCAGACGCGCAACCTGCTGGACGAACTCAAGCTGCACACGGTTTGCGAGAGCGCCAAGTGCCCGAACCATTGGGAGTGCTGGGAAAAAGGCACGGCCACGTTCATGATCGCCGGCGACCGCTGCACGCGGGCGTGCGGGTTCTGCGCGGTGGCCACCGCCAAGCCGCTGCCGCTGGAGGCGGACGAGCCGTTGCGCGTGGCGGAGGCGACGCGCCGGATGAAGTTGAAACACGTGGTGATCACCGCCGTGGCGCGCGACGACATCGCCGACGGCGGAGCGGATCATTTCCGCCGGACCATCGAGGAAGTCCGCCGGTTGAATCCGGACACGGTCATCGAAGTGCTGGTGCCGGATTTTCAGGACGACGACCGTTCGATCGAAGCGGTGTTGGCGGCAAATCCCGAAATTTTCAACCACAACCTGGAGACCATCCGCCGGCTGACGCCCAGCGTGCGGCATCGCGCGACGTATGACCGTTCCCTGAGCGTGCTGAAGAAAGTGAAGGACAGGCGCGGCAGCTCGATTTACACGAAGTCCGGCATGATGCTGGGTTTGGGCGAGACGGATGCGGAAGTGCTGGCGGCGATGCGGGATTTGCGCGCGGCCCGGTGCGATATTCTCACGCTGGGGCAGTATTTGCAGCCCACGTTGAAGCATCTGCCGATGGTGGAATTTGTGACGCCGGAGAAGTTTGCGGAATTCAAAAGGCGCGCCGAGGAAATGGGTTTTGTGCATGTGGCCAGCGGGCCGATGGTGCGGAGTTCGTATCACGCGGATGAATTCAAACTGCCGCCGGCGAAAGCGTGA
PROTEIN sequence
Length: 296
MTTTELKPRPRLPEWLRIKLPTSDSFAQTRNLLDELKLHTVCESAKCPNHWECWEKGTATFMIAGDRCTRACGFCAVATAKPLPLEADEPLRVAEATRRMKLKHVVITAVARDDIADGGADHFRRTIEEVRRLNPDTVIEVLVPDFQDDDRSIEAVLAANPEIFNHNLETIRRLTPSVRHRATYDRSLSVLKKVKDRRGSSIYTKSGMMLGLGETDAEVLAAMRDLRAARCDILTLGQYLQPTLKHLPMVEFVTPEKFAEFKRRAEEMGFVHVASGPMVRSSYHADEFKLPPAKA*