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berkeley_reactor_200306_planktonic_scaffold_23420_263

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 306295..306681

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S8 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFL7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 128.0
  • Bit_score: 172
  • Evalue 1.80e-40
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 128.0
  • Bit_score: 172
  • Evalue 2.60e-40
rpsH; 30S ribosomal protein S8 similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 135.0
  • Bit_score: 146
  • Evalue 4.00e-33

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 387
ATGAGCGATCCGATTTCCGATATGTTGACGCGCATCCGCAACGCGGGTGCCGCCCATCTGCCCACCGTGCTGGTGCCGCATTCCCGCATCAAGGAAAGCATGGCCAAGGTCTTGCAGGCTGAAGGTTACGTGGCCGATGTGGCCGTCGAGGGCGACAAGATCAAGAACATCAAAATCAAGCTGAAATTCAACGGCAAGAAAAACGTGATTGAAGGTCTCAAGCGCGTCAGCCGGCCCGGATTGCGCCGGTATGTCGGTGCCACCGAAATTCCCAGCGTGCGCCGCGGACTGGGCGTGGCCATTTTGTCCACCTCGGAAGGCGTGTTGTCCAGCACCGAGGCTCGCAAAAAAAATCTTGGCGGAGAACTGCTCTGCTACATCTGGTAA
PROTEIN sequence
Length: 129
MSDPISDMLTRIRNAGAAHLPTVLVPHSRIKESMAKVLQAEGYVADVAVEGDKIKNIKIKLKFNGKKNVIEGLKRVSRPGLRRYVGATEIPSVRRGLGVAILSTSEGVLSSTEARKKNLGGELLCYIW*