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berkeley_reactor_200306_planktonic_scaffold_23420_264

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 306688..307224

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFL6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 178.0
  • Bit_score: 272
  • Evalue 1.80e-70
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 178.0
  • Bit_score: 272
  • Evalue 2.50e-70
50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 177.0
  • Bit_score: 210
  • Evalue 3.10e-52

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 537
ATGTCGCGAATTGGAAAAATACCGATTGTCATTCCGCCCAAAGTGAAGGTGGAAGTCGCGGGCAAAGTGGTTTCGGTCGAGGGCCCGAAAGGCAAGTTGAAACTTGACCTGCCGCCCCGCACCAGCCTGACCGTGGAAAACGGCAAGGCTTTGCTGCATCGGGATGGCGATGATCCCAAGGCCAAGGCATTGCACGGCCTGAGCCGCGCGCTGGTTTGGAACATGGTCAAGGGCTGCAGCGACGGATTTGTGAAGAAGCTCGAAATCCAGGGCGTCGGTTTCAAGGCCGCCGTCCAGGGCAAGGTGATCAACCTCGCGCTCGGTTTTTCGCACCCGATCAACTATGATATTCCCGAGCAGGTGAAGGTCACCGTGGAGGACAACACCAAGATCACCATCGAAGGCCCGGACAAACGGCTGGTCGGGCTGGTGGCCTCGGAACTCCGCAGTTTCTATCCGCCGGAACCTTACAAAGGCAAGGGTGTCCGTTACGTTGGCGAACACGTCCAGCGCAAGGAAGGCAAGACGGTCCAATAA
PROTEIN sequence
Length: 179
MSRIGKIPIVIPPKVKVEVAGKVVSVEGPKGKLKLDLPPRTSLTVENGKALLHRDGDDPKAKALHGLSRALVWNMVKGCSDGFVKKLEIQGVGFKAAVQGKVINLALGFSHPINYDIPEQVKVTVEDNTKITIEGPDKRLVGLVASELRSFYPPEPYKGKGVRYVGEHVQRKEGKTVQ*