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berkeley_reactor_200306_planktonic_scaffold_78559_120

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 145612..147072

Top 3 Functional Annotations

Value Algorithm Source
Rhamnulokinase n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5T1Z6_9PLAN similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 484.0
  • Bit_score: 523
  • Evalue 1.60e-145
Rhamnulokinase {ECO:0000313|EMBL:EMI43119.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 484.0
  • Bit_score: 523
  • Evalue 2.20e-145
pentulose/hexulose kinase similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 486.0
  • Bit_score: 426
  • Evalue 9.90e-117

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Taxonomy

Rhodopirellula sp. SWK7 → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1461
ATGGCAACTCATTACCTCGCATGTGACCTCGGCGCCGACAGCGGACGCGTCATTCTCGGCACGCTCGAAAACGAAAAAATTTCCCTCGAAGAATTGCATCGTTTTCCCACCGGCGCCACCAAGGTGGCCGGCGCGTTGCACTGGGAATTCGACCGGCTGTTGAACGAGCTCAAGACCGGCCTGAAAAAAGCCGCCGCCAAAAACCTGCCCATCGCCGGCATCAGCACGGATTCCTGGGGCGTGGACTACGTGCTCTACGATGAACGCGGCCTGCCGATGGCGCCGGTCTGGTGCTACCGCGATTCGCGCACCGCCGTCGGCGTGGAAACCGTGAAAAGCCACGTGGAATGGCCGGTGATTTTTGCCGAAACCGGCATTCAGTTCATGGCGTTGAACACGCTTTATCAAATCGTCACCGAACCCGCCGAACGCCTCGCCCGGGCGAAACGGGCGTTGCTGATCGGCGACGCGTTCAACTACTTCTGCTCCGGCGTCGCGCGCAACGAGGTTTCCCTCGCCAGCACCACGCAGCTTTACAATCCGGTCCACCAGTCCTGGTCAAAGAAACTGTTTGACGCGCTGGGCTTGCGCGAGGATCTGTTTGCTCCGATCTGCCCCAGCGGCACGCGCCTCGGTCCGTTGAAAAAAAATCTCGCGACCGAAACCGGCCTGCCGCAAATCGAAGTCATCGCCTCCTGCTCGCATGACACCGGCGCAGCGGTCGCGGCGGTGCCCGCCGGCGACGGCAACTGGGCCTACCTCAGTTCCGGCACGTGGTCGCTGATGGGCGTCGAAACGTCCGCGCCCGTCATCAACGACCAGAGCCGCAGCCTGGGCTTCACCAACGAAATCGGCTACGGCAACACCGTGCGGCTGCTGAAGAACATCATCGGCCTGTGGCTGATCCAGGAATCGCGGCGGTATTGGGCCAGGACCGGCCGGAAACTGGAGTTCGCCGAGCTGGAAAAACTGGCCGCCGCCGCGCCGCCGTTTGAGTCGCTCATCAATCCCGACGACCCGCGCTTCCTGAGCCCGGACGGCATGCCAAAAAAAATCGCCGACTTCTGCCGTGAAACCGGCCAGCCGGAACCGGCGGACATCGGCGCGTGCGTCCGCTGCATTTACGAAAGTCTCGCGCTGTTCTATCGCGTCACCCTGCGCAAACTGGAGCGGCTCACCGGCAACAAAATGGACCGCCTGCACATTGTCGGCGGCGGCAGCCAGGCGGAGTTGCTGAATCAATTCGCGGCCAACGCCGTGAAAATTCCGGTGCTGGCCGGGCCGACCGAATGCACCGGCCTGGGCAACATCCTGGTGCAGGCCATTGCGCTCGGGCATTTGGAATCGCACGAAGCGGCGCGCGCGGTGGTGCGAAATTCATTCGCGTTGAAAACCTTCACACCGCAGGCGCCCGCCGCCTGGGACGCCGCGGCGGCGCGGTTTGAAAAACTGCTGACCTGA
PROTEIN sequence
Length: 487
MATHYLACDLGADSGRVILGTLENEKISLEELHRFPTGATKVAGALHWEFDRLLNELKTGLKKAAAKNLPIAGISTDSWGVDYVLYDERGLPMAPVWCYRDSRTAVGVETVKSHVEWPVIFAETGIQFMALNTLYQIVTEPAERLARAKRALLIGDAFNYFCSGVARNEVSLASTTQLYNPVHQSWSKKLFDALGLREDLFAPICPSGTRLGPLKKNLATETGLPQIEVIASCSHDTGAAVAAVPAGDGNWAYLSSGTWSLMGVETSAPVINDQSRSLGFTNEIGYGNTVRLLKNIIGLWLIQESRRYWARTGRKLEFAELEKLAAAAPPFESLINPDDPRFLSPDGMPKKIADFCRETGQPEPADIGACVRCIYESLALFYRVTLRKLERLTGNKMDRLHIVGGGSQAELLNQFAANAVKIPVLAGPTECTGLGNILVQAIALGHLESHEAARAVVRNSFALKTFTPQAPAAWDAAAARFEKLLT*