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berkeley_reactor_200306_planktonic_scaffold_78559_177

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 210393..211604

Top 3 Functional Annotations

Value Algorithm Source
Rod shape-determining protein RodA n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XG17_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 393.0
  • Bit_score: 545
  • Evalue 2.50e-152
Rod shape-determining protein RodA {ECO:0000313|EMBL:EEF61179.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 393.0
  • Bit_score: 545
  • Evalue 3.50e-152
cell cycle protein similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 431.0
  • Bit_score: 299
  • Evalue 8.80e-79

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1212
ATGTTTCAGCCACCCGCCAAGGAAAAATTCGACAAGCTCCAGATCCTGGCGCTGCTGGGGCTCATGTTCATCGGCACGGCCTTTGTTTACAGCGCCACGATGGTGAGCGCGGCGGAAATGGAGCGGGCCTGGTATGCCCAGGTGTGGTTCCGGCAGGTGATCTGGTATTTGCTGGGCACCGGCGCCGCGCTGGCAATTTGCGTGGTTGATTATCACACGCTGGCCCGGTGGTCCTTTGTCGTTTACTGGCTGATGATTGCCTGTTTGATCGCGGTTTTGATTCCGTTCATCGGCAAGACGCACGGCTGGGGCGCGCGGCGCTGGATTGACCTGCCGTTTTTCCAGTTCCAGCCGAGTGAATTTGCCAAACTCGCGTTCATCCTAGCGCTGGCCAATTTTTTGAGCCGGCCGGTGGACGAACTGCGGCAGCCGAAAATTTTCTGGCTGGGCATGGGCATGATGCTGCTGCCGTTTGTGTTGATTTTAAAAGAACCGGATTTGGGGTCGGCGCTGGTGCTGCTGCCGACGGGACTGGTGATGATGGTGGTGGCGGGCACGCCGCGCCGTTATCTGCTGAAGCTGGGCGGTATTGTCGGCGCATTTGCCGTTCTGTTTATTGTCGACATCAAGTTTTTACCAGCGCGCTGGCAGGTTCCCATGGAACAATATCAGCGCAACCGTTTGATGATTTATTTTGGTCGGGATTATACCGACTTCGCCAAGCCTGATGCCAGCGAGGCGGATTTGCAGAAACTACGTCAGCAAGAATCAGCCGATGGATATAACATTCATCAGGCGCTGATTTCCGTCGGCTCCGGTGGGCTCTTCGGAAAAGGCTGGCGGCAGGGAACACAAAACGCCCTCGGCTATCTGCCGCGGGCGGTGGCACACAACGACTTCATTTTCTCCGTGATTGCCGAGGAGGAGGGGTTCGTTGGCAGCGTGATTGTGATCATGCTGTATGCGGTGGTTCTCTTCACCGGATTGAGAATCGCCGGCCAGGCGCGCGACCGCCTGGGCAAACTCGTGGCGGTGGGCGTGGTCACGCTCATCTTCAGCCACGTGTTCATCAATATCGGCATGAACATTCGCATCATGCCCGTGACGGGTGTGCCGCTGCCGCTGTTATCTTACGGCGGATCTTCAGTGCTGTGCTCGTTGATCGCCGTGGGCCTGATGCAAAACATATACATCCATAGAAGAGGATACTGA
PROTEIN sequence
Length: 404
MFQPPAKEKFDKLQILALLGLMFIGTAFVYSATMVSAAEMERAWYAQVWFRQVIWYLLGTGAALAICVVDYHTLARWSFVVYWLMIACLIAVLIPFIGKTHGWGARRWIDLPFFQFQPSEFAKLAFILALANFLSRPVDELRQPKIFWLGMGMMLLPFVLILKEPDLGSALVLLPTGLVMMVVAGTPRRYLLKLGGIVGAFAVLFIVDIKFLPARWQVPMEQYQRNRLMIYFGRDYTDFAKPDASEADLQKLRQQESADGYNIHQALISVGSGGLFGKGWRQGTQNALGYLPRAVAHNDFIFSVIAEEEGFVGSVIVIMLYAVVLFTGLRIAGQARDRLGKLVAVGVVTLIFSHVFINIGMNIRIMPVTGVPLPLLSYGGSSVLCSLIAVGLMQNIYIHRRGY*