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berkeley_reactor_200306_planktonic_scaffold_161060_60

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(74064..76286)

Top 3 Functional Annotations

Value Algorithm Source
Glycoside hydrolase family 16 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAN3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 255.0
  • Bit_score: 274
  • Evalue 2.00e-70
Glycoside hydrolase family 16 {ECO:0000313|EMBL:EEF63068.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 255.0
  • Bit_score: 274
  • Evalue 2.80e-70
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 286.0
  • Bit_score: 243
  • Evalue 1.40e-61

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2223
ATGAAACCATTGCCGCTGAAACGAATGATTTTGAACCGCCTGACCCGGGGCGTTGTTGCCGGGCTGATGTTGGGCGCCGGCTGGGGCCGGCTGGCGTGGAGCCAAACCGTGGTGGGGCTGGATCCCGCGCAAAACTGGATCGGCTACATGAATGTTTTCGACCTGCCGGCCTCGGCGGGCGGCGATGGCGCTTATCAGGGCGGTGCGGGCGGCGTCTGGGCGGTGGCGGATTTAACCGCGGCGTTCAACGGTTCCACGTTGATCTTGGGACCGAACCAAATCAACGATTCCGGCACGTATTGGTATGTGGGCGGCGGGAAAAGCGGGGCGGCGGGGAACAAAATCATGGACGCCAACATGTATGTGCAAAACGATGCGCTGGCGGGGCAGACCTTGACGTTCACCGCGCACACGGCGACCAACACCCTCGGCGGCACCCTGCCGGCCTGGGAAGTGCCCGGGGTGCGGCCGTTCTCCACGGTGGCTTTCATCAAGGATTTTGACGCCGGCTACAACCTGGTTCGGTCCACCAATGTGGCTCTGACGGCGGGCGGGGATTTCCGGATAACGCTGGCCACCACGGCGGGTGAACATGTCCAGTATGGTTTTGAAACCGTGGGCCCGGACATCTGGTCCACGGACGTGAGCCAGGCCGGGACGGTGATGCTGACGCCGGCGACCAATGCCATCGTTTCCACCAATGCCGGATCCGGCTTGCTGGCCAATCCCGGTTTTGAATTGGATGCGTCCGGCGAAAGCCAGACGATGCCGGGCTGGAGCGCTTACGGTTCGAATGTTTTCGGGGAGATGGATGCCGGCGTCGCGCACAGCGGCAGTCACTATCTGAAAATGTATCAAGATTTCGGCGCGGGCGGCGTCAACTTCAGCGGAGTCTATCAGGACTATATTTCCGGTCCCGGCGCGCGGTATTTCGCGGAGGGATGGGCGGAATCGCTTTCCACCGATTTGTTGGCGGGACACAATGCGGCCTGGGTGGAAGTGACGTTTCGCGATGCTGACGCCAAAATTCTGGCGCTGTATCGTTCGGCGGTGCTCACCAACTTCGCCGGCGGCACATTTCCGGCCGGTGCCTGGCTGGATCTGGCGGTGACCAATCAATGCGACCCCGGCACGGGGACGGTGACCAACATGGTTCATCAATTGGTGGCGCCGGCGGGAACCTGCTTTGTGCGGCTGCAACCGGTGCTGCGGGGCGACGGCCAGGGTTCCGGCGGGTCCATTTATTTCGACGACTTGAAACTGACTTCCGCGGGGGGCGCGGCTTATGGCGATTGGAACATTGTTTGGGACGATGAATTCAACGACCCGAGCATCAATCCGGCCATTTGGACTTATGACACCGGCACGGGCTGTCCCAACTGCGGCTGGGGCAACAGCGAACTGGAGTTCTACACCAGCCGCGCGAGCAATGTGTATGAAGCCGGCGGATTGCTGCACATTGTGGCGCGGGCGGAATCTTACGGCGGCGCCAGCTACACCTCCGCCCGGCTGAAGTCCCAGGGGTTGTTTTCCAGCCGATACGGCCGGATTGAGTGGCGGGCCAAACTGCCGCAAGGTGTGGGCTGCTGGCCGGCCCTCTGGCTGCTGGGCACGAACATCACGTCGGTCGGCTGGCCGGGTTGCGGAGAGATAGATGTGATGGAAAACAACGGCGGCGATCCCTTCACCGTGCAGGCCAGCCTGCATTCCGGCAGCGATGAAACGGGTTATTACCACTTTACCGGCGCCAGCGCGGCGGCGGCTTTCCACACCTACACCCTGGACTGGACGACGAACGCGCTGTTGTTTTATGTGGACGGACATCTTTACGAATCGCAAAACCATTGGTCCAGTTCGGTGTCCGGCTATCCCTTTCCGTTCAATCAACCCTTTTTCTTTGTCATGAATCTGGCCATTGGCGGCAATTATGTCGGCAACCCGAGCGACGCGGACATTAATTCCGGCACGGATTTCCCCGTGGAAATGCAGGTGGATTACGTCCGCATTTATCAGCCCACCGCCCCGCTGAAGCTTTCCATTGCCGAAACCAATTCCCGCCTGCGGTTAAGCTGGCCCAGCAATATCGTCGGCCATCTCCAGATCCAAACGTCGGCTTCCGCAGCGCCGGGAGGCACCAACTGGCTGGATACCAGCCTGACTGCAAATCCGATGACGCTCTCGCCCACCAACCGGGAAGTCATCTTCCGCGTGGCTTCACCGTAA
PROTEIN sequence
Length: 741
MKPLPLKRMILNRLTRGVVAGLMLGAGWGRLAWSQTVVGLDPAQNWIGYMNVFDLPASAGGDGAYQGGAGGVWAVADLTAAFNGSTLILGPNQINDSGTYWYVGGGKSGAAGNKIMDANMYVQNDALAGQTLTFTAHTATNTLGGTLPAWEVPGVRPFSTVAFIKDFDAGYNLVRSTNVALTAGGDFRITLATTAGEHVQYGFETVGPDIWSTDVSQAGTVMLTPATNAIVSTNAGSGLLANPGFELDASGESQTMPGWSAYGSNVFGEMDAGVAHSGSHYLKMYQDFGAGGVNFSGVYQDYISGPGARYFAEGWAESLSTDLLAGHNAAWVEVTFRDADAKILALYRSAVLTNFAGGTFPAGAWLDLAVTNQCDPGTGTVTNMVHQLVAPAGTCFVRLQPVLRGDGQGSGGSIYFDDLKLTSAGGAAYGDWNIVWDDEFNDPSINPAIWTYDTGTGCPNCGWGNSELEFYTSRASNVYEAGGLLHIVARAESYGGASYTSARLKSQGLFSSRYGRIEWRAKLPQGVGCWPALWLLGTNITSVGWPGCGEIDVMENNGGDPFTVQASLHSGSDETGYYHFTGASAAAAFHTYTLDWTTNALLFYVDGHLYESQNHWSSSVSGYPFPFNQPFFFVMNLAIGGNYVGNPSDADINSGTDFPVEMQVDYVRIYQPTAPLKLSIAETNSRLRLSWPSNIVGHLQIQTSASAAPGGTNWLDTSLTANPMTLSPTNREVIFRVASP*