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berkeley_reactor_200306_planktonic_scaffold_158606_52

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(61685..62983)

Top 3 Functional Annotations

Value Algorithm Source
Putative Cation efflux system protein CzcC id=1778315 bin=GWB2_Proteobacteria_55_19 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 31.2
  • Coverage: 381.0
  • Bit_score: 204
  • Evalue 1.50e-49
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 28.2
  • Coverage: 412.0
  • Bit_score: 169
  • Evalue 1.50e-39
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 33.3
  • Coverage: 390.0
  • Bit_score: 218
  • Evalue 1.80e-53

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Taxonomy

R_Deltaproteobacteria_42_39 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1299
ATGAACCGATTGTATTTTTGCAGTTTGCCACTCCTCCTGGCGGTGGCGCTCGGAAGCGCAAATGCGTTGCCGGCGAAAAGCCAGGACACAAATGCCATTCCCGACACGGGTGCGCTGACGCTGGACGCAGCGATTCGCCTCGCGCTCGAAGACAATCCCGACCTCCGCGTGCTGGCGGCGGGCATTGCGGCGGCGCGTGGCGAGGTGACGACCGCAAAGACGTGGCAGAATCCCGATCTCTCGGTCGCACCGGGTTTCAAAACATTCCGGGATACTTCGGATACGCAATTCCACGGTAATTTTGGACTGGATCAAACCTTCGAGTGGCCGGGCAAACGCGCGTTGCGCCGTGCCGTCGCCGAAAAGAATGTCGCCGTGCGTGAACTCGCGCTGGACGGTTTCCGCTCCCAGCTTGCCATCCAGGTGCGTCGCGCCTACTTCACCTTGCTCGCGACGCGCGAAGTCGTGGCGCTGCGCGAACAACGGTTGAATCTCGTCCGGTCATTCGTGGACGCGGCGAAGAAAAGAGTTGAAGGCGGCTACGCTCCGGAATTCGAGGCGACCAAGGCGGAGGTTGAAGTTGTGACCGCGCAAAAATCCTTGCGCGAAGCGCAGGCGCAACAGGACGCGGCGAGCGTGGCATTAAATGCCTTGATGGGGCAGAAACCGAATGCGCCGCTGATCATCGCCGGAAGGCTTGGCGACAATGTGGCATTGCCCAGCCAATCCCTGCTGCTGGAACGGGCATTGATTCAAAATCCGGCAATCAAAGTTCAAGAAGCCGAAGCGGAGCGCACCGGGTTAAGTCTGCAATCAGTCCGCAAATCGCGCCTGCCGGATTTCAAGGCGGGGCCGAACTTGGAATACACCCGCGAAGAACAGATTTTCGGGTTTGGCATCACGCTGCCGTTGCCGTTGTGGGACAACAAAAAGGGCGAGATCGCCAGTGCCACCGCCGAGCAGGAAAAAGCCCTGGCCGAATTGGAAAAGCTGCGCCGCGAAATCCTGCGCGACGTGACGACCGCCTCGCAGAATTTCACGTCGGCCGAGGAATCGCTTGCGTTCTACACACCTGAATTGCGCAACAAGCTCAAGGCATCGCTTGAGGCCGCCGCGCAAAGTTATTCGGAAGGCCGCACGCCCTTGCTGCTCTATCTCGAATCCCAGCGCACCTGGTTTGACACCCAGGCTGATTACTTTGACACCCTGCAAAAAACTTTTGAAGCGCAGGCGGAACTGGAATCCGCCATTGGCGTTCCGCTCGGCCAACTTTTCCAACCCCAAACCGAATCCAAATGA
PROTEIN sequence
Length: 433
MNRLYFCSLPLLLAVALGSANALPAKSQDTNAIPDTGALTLDAAIRLALEDNPDLRVLAAGIAAARGEVTTAKTWQNPDLSVAPGFKTFRDTSDTQFHGNFGLDQTFEWPGKRALRRAVAEKNVAVRELALDGFRSQLAIQVRRAYFTLLATREVVALREQRLNLVRSFVDAAKKRVEGGYAPEFEATKAEVEVVTAQKSLREAQAQQDAASVALNALMGQKPNAPLIIAGRLGDNVALPSQSLLLERALIQNPAIKVQEAEAERTGLSLQSVRKSRLPDFKAGPNLEYTREEQIFGFGITLPLPLWDNKKGEIASATAEQEKALAELEKLRREILRDVTTASQNFTSAEESLAFYTPELRNKLKASLEAAAQSYSEGRTPLLLYLESQRTWFDTQADYFDTLQKTFEAQAELESAIGVPLGQLFQPQTESK*