ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_158606_80

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(92669..95857)

Top 3 Functional Annotations

Value Algorithm Source
transporter n=1 Tax=Fluoribacter dumoffii RepID=UPI0002E21B31 similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 1069.0
  • Bit_score: 1250
  • Evalue 0.0
Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 1069.0
  • Bit_score: 1250
  • Evalue 0.0
Chemiosmotic efflux system protein A (CzcA) {ECO:0000313|EMBL:ADG24374.1}; TaxID=423212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila serogroup 1 (strain 2300/99 Alcoy).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 1075.0
  • Bit_score: 1235
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Legionella pneumophila → Legionella → Legionellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3189
ATGCTTAACAAACTGATCTATTGGTCGCTGAAAAACCGGCTGCTCGTCGTGGTCGGGTTGGTGGTGTTTCTGGTCGCGGCGAGCTACTCGACGATGCACATGCCGGTGGATGTGTTCCCCGAATTCGCGCCGCCGCAGGTCGTCATCCAGACCGAATCGCCCGGCCTGGCTCCCGAAGACACCGAATCGCTCATCACTTTTCCGATTGAGAGCGCCGTCAATGGCACGCCGGGCGTGGAAAATGTCCGCTCCTCCTCCTCGGTCGGCCTGTCCACCGTCACCATCGTGTTCCGCTGGGGCACGGATATTTATGTGGCGCGGCAGTTGGTGAACGAGCGCATCCAGTCGGTGCGCGACCGTTTCCCCGCCGGCACCCAGGCACCCGTGATGCTGCCCATCACGTCGGCGGTCGGGTGGATGATCAAATACAGCCTCGAAAGCGACACACGTTCGCCGATGGATTTGCGCACCATTTCCGACTGGCAAATTCGTCCGCGCATTCTCGCGCTGGGCGGCGTCGCCTCGGTCGTCAGCATCGGCGGCGAGGTAAAACAATATCAGGCGTTGCTCGACCCCGACCGTATGCGTGCTTATCGGGTCAGCGTTGCTGAAGTGCGCGAGGCGCTCGCCAAAGCCAACCTGAATGTTCCCGGCGCGTTTCTGCAAACGCCCGGACGCGAATTCATCGTTACCGGCGTGGGCCGCGTCGAATCGCTGGACGACGTTCGCAACACCGTCATCAAATACGTCAAAGGCACGCCAATTTATGTCCGTAACGTCGCGGACGTGCAGTTCGGCCCGGAAATCAAACGCGGTGACGGCGCGCTCGACCTCAAAAACGCCGTGATTGGCACGATTTCAAAAGCCTACGGCGCGGACACGCTCACGACCACCTACAAGGTTGAGCAGGCGTTGGACGACATTCAGAAACAACTGCCGCCGGACGTGAAAATGAACATTCACGTCTTCCGCCAGGCGGATTTCATCGAAGGCTCGATTCGGAATCTCAAAACCGCGCTCATCGAGGGCGGCATCATCGTCACCTTGGTTTTGATCATTTTCCTGATGAACTTCCGCGCCTCGTTCATCAGTTTCATCTCCATGCCCGTGTCGTTGCTGGCAGGCGTGATGGTGCTGAAATGGTTCGGGGTGAGCCTCAATTCCATGACCATCGGCGGTCTGGCCATCGCCGTCGGCGAGGTTGTGGACAACGCGATTATCGGTGTGGAAAATTGTTTCCGCCGACTACGACTGAATCGCGAATCTCCATCGCCACGTCCGGCATTCGATGTCGTGTTCGAGGCCACCAGCGAAATCATGAACTCGGTGGTTTATGCCACGTTTATTGTGGGCATTGTCTTTCTGCCCATCTTTTTCCTGCCCGGTCTGGAAGGACGCATCTTCGCGCCCTTGGGGATTGCCTACCTTGGCGCGTTGATTTGTTCGCTCGTGGTGGCCGTTACTGTCACGCCCGCGCTGTGCTATCTGCTCATCGGCAATGCGAAGAATGAACTGAAGGAGAGCTTTGTCGCGCGCTGGCTTAAAAAATACTACGAGCGGCTGCTGCATTTCTCGTTGCGGCATATCTGGCCGGTGGTCATCGCGGCGTCAGTGCTGATTGTGATTGCCGGCGCGTTGATTCCGACCTTTGGCCGTTCGTTCCTGCCGGAATTTCACGAGGGCAATTTCATCGTCGCCATGACCACGCTGCCGGGCACCTCGTTGGAAGAATCCATGCGGCTCGGCACGCTGGTGCGGGCCGACCTGCTGAAATATCCCCAGACCGTTTCCATCTCACAGCGAGCCGGACGCAGCGAACTGGACGAAGACGCCCAGCCGCCGAACTTCAGCGAGTTCGACGTGAAGCTCGATTACGACCGCGACAAAAAAATGCCGCCGGATGAATTGCTGCGCCGCATCCGGGCCGACTTGGCGGAAATTCCCGGCACGGTGTTCAACGTCGGCCAGTTCATCGCCCATCGCATGGATGAAGTGCAGTCCGGCATCCGGGCGCAGGTCGCCATCAAGATTTACGGCGACGACCTCAATGTGCTACGTCAGAAAGGCCAGGATGTGCTGAAGGTGATGCAATCCATTCCTGGCGTGGCCGACCTCGCGTTGGAACAGCAGATCAACGTGCCGCAGCTCATCATCAAGCTGGATCGCGAAAAGGCCAGCCGTTACGGCCTGAACATCGGCGACCTGTCCGAAACCATCGAGACGTTGCTCAACGGCACGGTGGTCTCGCAGGTGCTGGAAGGCCGCAAGACGTTTGACCTGTTCGTGCGCTTGGACGCACCGGCGCGGCAGGACATTGACGCGATTCGCAACATGCTCGTGGACGCTCCCGCGCTGGGCAAAGCTGGCGCGAAGATTCCGTTGCGCGAAGTCGCCGACGTGCGGTTTGAGCAGAAGCCTTACTTTATCAACCGCGAAAACGTCCAGCGGCGCATCGTCGTCCAGTGCAACGTCGCCGGACGCGATCTCAACAGCCTCATCGTCGAAGCGCAGAAGAAAATCGCCGAGCAGGTCAAACTACCGGCGGGCTATTTTATCGAATACGGCGGGCAGTTCGAGAGCCAGCAGGAAGCGCAGCGGATTCTCATGATCTTCGGCATCGGCGCGGTGATCGGCATTTTCATGATGTTGTTTCAAGCCTTCGGCACGACGCGCGAGGCGCTGCTGGTGATGCTCAACCTGCCGCTGGCGCTGATTGGCGGAGTCGTCGCGGTCTATCTCGCCGGCGGTGATTTAAGCGTGCCCGCCATCATCGGCTTCATTAGCTTGTTTGGCATCGCGTCGCGCAACGGCGTCATCCTCGTGAGCCATTACAGCCAACTCCGCGCCGCAGGCAAATCGCTGCATGAAACCGTGGTCGAAGGCTCGCTGGACCGCCTCAATCCCGTGCTGATGACGGCGGCAACTGCCGCGCTGGCTCTCTTGCCGCTGCTGTGGGGCAGCCCCACGGGCAAAGAACTGGAACGCCCGCTGGCACACGTCATTTTGGGCGGCCTAGTCACTTCCACCTTCTTGAACATGGTCTTGATTCCGACCTTGTATAACAAGATTGAGGAAATCCGCGAACGTCGCGCCGCCAAAAAGTCCGGCGCACAAAAACAATCTGGAGCGGGAGAGACAACGGTTGACTCTCCGGCTTCAAACGACGACCAACAAAAACCAACCGAGTAA
PROTEIN sequence
Length: 1063
MLNKLIYWSLKNRLLVVVGLVVFLVAASYSTMHMPVDVFPEFAPPQVVIQTESPGLAPEDTESLITFPIESAVNGTPGVENVRSSSSVGLSTVTIVFRWGTDIYVARQLVNERIQSVRDRFPAGTQAPVMLPITSAVGWMIKYSLESDTRSPMDLRTISDWQIRPRILALGGVASVVSIGGEVKQYQALLDPDRMRAYRVSVAEVREALAKANLNVPGAFLQTPGREFIVTGVGRVESLDDVRNTVIKYVKGTPIYVRNVADVQFGPEIKRGDGALDLKNAVIGTISKAYGADTLTTTYKVEQALDDIQKQLPPDVKMNIHVFRQADFIEGSIRNLKTALIEGGIIVTLVLIIFLMNFRASFISFISMPVSLLAGVMVLKWFGVSLNSMTIGGLAIAVGEVVDNAIIGVENCFRRLRLNRESPSPRPAFDVVFEATSEIMNSVVYATFIVGIVFLPIFFLPGLEGRIFAPLGIAYLGALICSLVVAVTVTPALCYLLIGNAKNELKESFVARWLKKYYERLLHFSLRHIWPVVIAASVLIVIAGALIPTFGRSFLPEFHEGNFIVAMTTLPGTSLEESMRLGTLVRADLLKYPQTVSISQRAGRSELDEDAQPPNFSEFDVKLDYDRDKKMPPDELLRRIRADLAEIPGTVFNVGQFIAHRMDEVQSGIRAQVAIKIYGDDLNVLRQKGQDVLKVMQSIPGVADLALEQQINVPQLIIKLDREKASRYGLNIGDLSETIETLLNGTVVSQVLEGRKTFDLFVRLDAPARQDIDAIRNMLVDAPALGKAGAKIPLREVADVRFEQKPYFINRENVQRRIVVQCNVAGRDLNSLIVEAQKKIAEQVKLPAGYFIEYGGQFESQQEAQRILMIFGIGAVIGIFMMLFQAFGTTREALLVMLNLPLALIGGVVAVYLAGGDLSVPAIIGFISLFGIASRNGVILVSHYSQLRAAGKSLHETVVEGSLDRLNPVLMTAATAALALLPLLWGSPTGKELERPLAHVILGGLVTSTFLNMVLIPTLYNKIEEIRERRAAKKSGAQKQSGAGETTVDSPASNDDQQKPTE*