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berkeley_reactor_200306_planktonic_scaffold_204825_41

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(49436..50104)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q3N1_STANL similarity UNIREF
DB: UNIREF100
  • Identity: 35.3
  • Coverage: 204.0
  • Bit_score: 116
  • Evalue 2.10e-23
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 204.0
  • Bit_score: 116
  • Evalue 5.80e-24
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 39.9
  • Coverage: 193.0
  • Bit_score: 131
  • Evalue 1.50e-27

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
GTGCCCACTGCCAAAACCAAGCCGGCTTGCAGCAGCCCACGCGATCCGGACCGGACGCGACGGCGCATTCTGGACGCCGCCCTGAAGGTGTTCGCGGCGCGCGGCTTCGCCGGCGCGCGGGTGAATGAAATCGCCCGCAAGGCCGCCACCAACAAGCGCATGCTGTATCACTATTTTGGCGACAAGGAAGGGCTCTTTCGCGCGGTCCTGCGCCATAAGATTCAGCAGCGGCGGACGAGCGTGGAGGCGCAACTGCCGGGTTCGGAATACGCCTCCCGGATGCCGCTGTGGTTCCGGCAAAACTGCCTGGACGCCGACTGGGTTCGCCTGCTGGCGTGGGAATCGTTGCAAACGACCAGGGATTGTGTGGTGGACGAGCGCGAGCGCCGCCGTCATGCGCGCGAGGGGGCCGCCCGCATGCGGAAACGGCAGCGGGCCGGTTGGTTGCGCGATGATGTGCCGGTGGCTTTTTTGCAGCTCGCCAAAACTTCCCTGACCATGTTTCCCATGGCCATTCCGCAACTGGCCCGCATCATCACCGGACGCTCGCCGCGCGATCCCAAATTTCAGCGGGAGTATGCCAAGTTTCTCGAAACCATTTCCACGGCATTTCGTCCTTCATTGGGAATGAAGAAAATTAAACGCGTGCAACGAACCGGCAGTGAATAA
PROTEIN sequence
Length: 223
VPTAKTKPACSSPRDPDRTRRRILDAALKVFAARGFAGARVNEIARKAATNKRMLYHYFGDKEGLFRAVLRHKIQQRRTSVEAQLPGSEYASRMPLWFRQNCLDADWVRLLAWESLQTTRDCVVDERERRRHAREGAARMRKRQRAGWLRDDVPVAFLQLAKTSLTMFPMAIPQLARIITGRSPRDPKFQREYAKFLETISTAFRPSLGMKKIKRVQRTGSE*