ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_198771_72

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 80663..81469

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003674E4A similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 254.0
  • Bit_score: 185
  • Evalue 5.70e-44
Uncharacterized protein {ECO:0000313|EMBL:EEF63067.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.6
  • Coverage: 257.0
  • Bit_score: 184
  • Evalue 1.40e-43
prepilin-type N-terminal cleavage/methylation domain similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 240.0
  • Bit_score: 100
  • Evalue 5.20e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 807
ATGAAGAAACTGAGACTCAATAAACAAGAACGCGGCGCATTTACGCTCATTGAACTTTTGGTGGTCATCGCGATCATTGCCATTCTGGCGGCGATGCTGCTGCCGGCGCTGGCGGCGGCCAAGGAAAAGGCCAAGCGCACGCAGTGCCTCAATAATCTCCGGCAGTTGGGCATTGGCTTCACCATGTATGCCAATGATAACAATGACACGTATGCGCCCGCAGCCTTGAACGGCGGATGGGGCAGGCAGAATCCCATTCAATTGAGCGCGGAGTTGATTGAGTCGGCCTCGGAACTGGGTTTTAAAACCAATTCCATTGACACGGCCCTCGGGTATTCGATCCGGCCCTCCATCTGGTCCTGTCCGGAGCGTTCAACCCTGCCCGCCCCGGACCGGTGGCCCAACCCGACGACCTGGGCCATGGGCTACCAGTATTACGGCGGGATTAAAAATTGGTTTACTACCGGCGGCAGCCAGGTGGCCTCCGCCAGCCCGATCAAATCCGGCAATTCCAAGGCGGCCTGGATGCTGGCGGCGGATGCCGTGGTGGATTTCAGCGCTCCGCCAGCGAAGCAGTGGACGGCTGCGGGCGAACCGAAAAACAGCGGCTGGTATGACCTGCCGGCGCACAAGGCCGACAATGGTCCGGCCGGCGCCAACGAGGTTTTTGTGGACGGATCGGCTTCGTGGAATAATGCCAAGCAACTGTTCAATGTGTATCAGGGCAATGGTCGTTACTTTTTTATCTATCAGTCCGATTTGGGCGCGGCCGAGCGATACGCCAATAGTTTCACCCGCTTGCCATAA
PROTEIN sequence
Length: 269
MKKLRLNKQERGAFTLIELLVVIAIIAILAAMLLPALAAAKEKAKRTQCLNNLRQLGIGFTMYANDNNDTYAPAALNGGWGRQNPIQLSAELIESASELGFKTNSIDTALGYSIRPSIWSCPERSTLPAPDRWPNPTTWAMGYQYYGGIKNWFTTGGSQVASASPIKSGNSKAAWMLAADAVVDFSAPPAKQWTAAGEPKNSGWYDLPAHKADNGPAGANEVFVDGSASWNNAKQLFNVYQGNGRYFFIYQSDLGAAERYANSFTRLP*