ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_198771_88

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 104811..105884

Top 3 Functional Annotations

Value Algorithm Source
von Willebrand factor type A n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQJ5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 357.0
  • Bit_score: 479
  • Evalue 1.50e-132
von Willebrand factor type A {ECO:0000313|EMBL:EEF57920.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 357.0
  • Bit_score: 479
  • Evalue 2.10e-132
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 355.0
  • Bit_score: 269
  • Evalue 8.70e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1074
ATGAGCGGCGAATTTGAATTTCAATATCCGTGGCTGCTGGTATTGCTCGGCTTGCTGCCGCTTTACGCCCTCTTGCGTGGCAAGGCCGGCAAGCTCTCGGCGCTCGCTTTTTCCAGCGCGGAGATTGCGCGGGCCGCCGGTGCGAAGGCGAAGTCCGCCGCCGGCCGGTTCCTCGCCTTCTTGAGACTCCTGGTGGTGGCGCTGGCGATTGTGGCGCTGGCGGGACCGCGGCTGGCGAATTACCACACGGAAACCGAAACGCCGGGCATTGACATCATGCTCGTGCTGGATTTGTCCTGGTCCATGATGGCGGTGGACATGGGCAAGCCGGCGGAAAAACTCACGCGGTTCGCCTGCGCCTCCAGTGTGTTGCAAGATTTCATCGAGAAACGCCCCGATGACCGCATCGGGCTGATTGCTTTTTCCGGCGTGCCGTATCTGGCCAGCCCGCTCACGCTGAATCATGACTGGCTCATCGAAAATCTCCAGCGGCTTTACATCGGCATCATCGGTATTTCCTACAATGCGCACGGCGTGGCCCGGGACGAGCGGGGCACGGCCATCGGCGACGCGGTGGCGGACGCCGCCAAGCGCCTCAAAGCGGTGCCCAACAGCAAAAGCCACATCATCATTCTGCTGACGGATGGCGACAACAACAAGGGGGAGATAGATCCCATTCCCGCCGCGCAACTGGCGGCCGCGCTGGGCACGAAAATTTACGCGATCGGCCTCGGTGTCGAGCAGCCATGCAATCTGCCTTCGTTTGATCCGGCCACCGGGAAATTGAAGCTTGATGCGAACGGCAACCTCATTCCCACGATGTTGTTGCAGCCGGCGAATTATTCCGTGCTGGGCAAAATGGCGCAGCTTTCGGGCGGCCATTTTTATCGCGCCACGAACCGGCGTGAATTGCAGAGCATTTACGATCAAATTGATCATCTCGAAAAATCCAAGGTGAAATTGCGGCGCTACGCCACGTATCAGCCGCTGTTTGCCTGGCCGCTGCTGGCCGCGCTGGGCTTGTTGGCGCTGGAATTGATTTTGAGCAATACCCGATTTCGTCGCGTGCCATGA
PROTEIN sequence
Length: 358
MSGEFEFQYPWLLVLLGLLPLYALLRGKAGKLSALAFSSAEIARAAGAKAKSAAGRFLAFLRLLVVALAIVALAGPRLANYHTETETPGIDIMLVLDLSWSMMAVDMGKPAEKLTRFACASSVLQDFIEKRPDDRIGLIAFSGVPYLASPLTLNHDWLIENLQRLYIGIIGISYNAHGVARDERGTAIGDAVADAAKRLKAVPNSKSHIIILLTDGDNNKGEIDPIPAAQLAAALGTKIYAIGLGVEQPCNLPSFDPATGKLKLDANGNLIPTMLLQPANYSVLGKMAQLSGGHFYRATNRRELQSIYDQIDHLEKSKVKLRRYATYQPLFAWPLLAALGLLALELILSNTRFRRVP*