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berkeley_reactor_200306_planktonic_scaffold_198771_99

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(115953..116777)

Top 3 Functional Annotations

Value Algorithm Source
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B3B1_TURPD similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 271.0
  • Bit_score: 250
  • Evalue 1.50e-63
tRNA/rRNA methyltransferase (SpoU) similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 271.0
  • Bit_score: 250
  • Evalue 4.20e-64
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:AFM11768.1}; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H); (Leptospira parva).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 271.0
  • Bit_score: 250
  • Evalue 2.10e-63

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Taxonomy

Turneriella parva → Turneriella → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 825
GTGGCAAACCTGCTCATCCAGAAAATCACCGCGCTCGACCGGCCGGAACTCGCGCCGTATCGCACGCTCAAGCGCTACGCCGAGCATGAAAAACTCGGCATCTTCGTGGTCGAAGGCGACAAGGTTTTGGATCGCCTGTTGGCAAGCGATTTCACGGTCGTCTCGGTGCTGTTGATTGCGGAGCGGCTGGCGGAATACGCACCGCGCCTGCGCGCGCGCCGGGAAAAGGAAATCACCGTGTTTGTCTGCGCCAAGGCGGTGCTGGCCGCGCTGGCCGGATTTGAAATTTATCAGGGCGTGCTGGCCATCGCCCAAATTCCCGCCCGGCTGTCCCTGCCGGAAATTCTGGCCCGCAGTCCGCGCCCGCGCTGTTTTGTGGCGATGGACGGATTGTCCAACGCGGAAAACGTCGGCACCCTCATGCGCAACTGCCTCGCGTTCAGCGTGCAGGCGTTGATCGCCGGGGAAACGTGCAGCAGCCTGTATCTGCGCCGCACCGTGCGCAATTCGATGGGCGCGGCGTTCCAGCTTCCCATGCTGGAATCGGACAACCTCCTGGAAACCCTGCGGGAATTGCGCGCCAACGGCATCCGCTGCATCGCCGCGCATCCGCACGCAAACCAGCGGAGTTTGTCGCAGGCCGAGTTCACCGGCGATTGCTGCATCGTGGTCGGCAGCGAGGGCCACGGCATTTCCCCGGAGATTCTGGCCGCGTGCGCGGAAGCGGTCGCCATTCCGATGGCGAACGCGGTGGATTCCCTCAATGTCAGCGCCGCCACAGCCGTCTTTCTCTACGAAGTGAACCGTCAGCGCGGAACGGCTTGA
PROTEIN sequence
Length: 275
VANLLIQKITALDRPELAPYRTLKRYAEHEKLGIFVVEGDKVLDRLLASDFTVVSVLLIAERLAEYAPRLRARREKEITVFVCAKAVLAALAGFEIYQGVLAIAQIPARLSLPEILARSPRPRCFVAMDGLSNAENVGTLMRNCLAFSVQALIAGETCSSLYLRRTVRNSMGAAFQLPMLESDNLLETLRELRANGIRCIAAHPHANQRSLSQAEFTGDCCIVVGSEGHGISPEILAACAEAVAIPMANAVDSLNVSAATAVFLYEVNRQRGTA*