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berkeley_reactor_200306_planktonic_scaffold_198771_133

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(168191..168436)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI00036F0569 similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 82.0
  • Bit_score: 120
  • Evalue 4.00e-25
Regulatory protein FmdB family {ECO:0000313|EMBL:CDD94158.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 86.0
  • Bit_score: 83
  • Evalue 1.30e-13
FmdB family regulatory protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 86.0
  • Bit_score: 82
  • Evalue 3.40e-14

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Taxonomy

Akkermansia sp. CAG:344 → Akkermansia → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 246
ATGCCTCTTTACGAATACGAATTGTGCGAGGGCGAATGCAAGGTCTGCGGTGGATCGTTCACCTTGAACCGCCCGCTGTCCGCGCCGCCGTTGACCAAATGCCCGGCCTGCAAAAAGCCGGTGCGCAAGATCATTTCCGGTTTCAGCACCCCCCACAAACTCAAGCCGCTGTCCGTCACCGACGCGAAAAAAGCCGGGTTCCAGGTCTATAAACGGCTCGGCAAGGGAGAATATGAGCGGCAATGA
PROTEIN sequence
Length: 82
MPLYEYELCEGECKVCGGSFTLNRPLSAPPLTKCPACKKPVRKIISGFSTPHKLKPLSVTDAKKAGFQVYKRLGKGEYERQ*