ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_198771_223

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(278977..279798)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3JF82_NITOC similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 262.0
  • Bit_score: 200
  • Evalue 1.30e-48
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 276.0
  • Bit_score: 203
  • Evalue 7.60e-50
Uncharacterized protein {ECO:0000313|EMBL:AHK79081.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 276.0
  • Bit_score: 203
  • Evalue 3.80e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorhodospira halochloris → Halorhodospira → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGTTCAGTGACCGAAGCAACATTACCAACGTCGAAATCAGCGACAGCGACATTCGCAACGCCGCCCCGGCCGTATTCGCCGAGGCACCCATGCCCGGAGCATCCACCCGTTACACTTTCCTGCCAACGGGCCAAATCGTAACCGCCATGCGGGCCGAGGGTTGGAAGCCTGTTGAAGCCAGGCAAATGGGCGTGCGCCGGATGGAGCACAGCGGCTTTCAACGCCACATGGTCAGGTTTCAGCGCCGCGACGTGATCGCCGAGGTGGACGAGTTTGCGCCAGAGGTGATTTTGCTCAACAGCCATGACCGGACCAGCGGCTACCAAATCCACTCCGGGCTTTTCCGGTTTGTCTGCCGCAACGGTTTGCTTGTGGCCGACAGCCTCATTCCGAGCATTCACGTTCGCCACACGGGGCACGAAGTTCCCGAAATCATCAAGGCCAGCTTCCAGATTCTTGGGCAGCTTCCCTTGTTGGCCGAACGGGTTGCCAGCTTCCGCAAAACCCTGCTCAGCGAAAGCGCGGCCAAAGGGTTTGCCAGCCAGGCCCTTGAATTGCGCTACGCGGACCCGAACCGAGCACCAATCCGAGGGGAGCAGTTGCTTACCATTCGCCGCTCTGAGGATTGCGGCAATGACTTGTGGGCCGTGGCGAACAGGGTACAGGAAAACTTGCTCCGGGGCGGGTTGCGCGATGCCGACCGCCGCAACCGTGAAGGCAAGCCATTCCGGCCTATGCGAGCCATCCGGGGCCTACAGGCCAATGTGAAGCTCAACCTGGGCATTTGGGCGCTGGCCGAGAGCTTCCGTCACCTGAACTGA
PROTEIN sequence
Length: 274
MFSDRSNITNVEISDSDIRNAAPAVFAEAPMPGASTRYTFLPTGQIVTAMRAEGWKPVEARQMGVRRMEHSGFQRHMVRFQRRDVIAEVDEFAPEVILLNSHDRTSGYQIHSGLFRFVCRNGLLVADSLIPSIHVRHTGHEVPEIIKASFQILGQLPLLAERVASFRKTLLSESAAKGFASQALELRYADPNRAPIRGEQLLTIRRSEDCGNDLWAVANRVQENLLRGGLRDADRRNREGKPFRPMRAIRGLQANVKLNLGIWALAESFRHLN*