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berkeley_reactor_200306_planktonic_scaffold_198771_272

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(335680..338634)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDX0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 858.0
  • Bit_score: 538
  • Evalue 7.50e-150
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EEF61861.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 858.0
  • Bit_score: 538
  • Evalue 1.00e-149

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2955
ATGCCTAGCCAAAATCAGACGGAACTCAGAAAACAGTTCACGCAGCGTCAACTGCCGTGGGTGCTGGGGGGAGTGATGCTGCTGATTTACCTGCTGACCCTCAACCACTGGGTCACCCTCGCCAACCTCATGCCGGTGGCCAAGGTGTCCGGCTTCCTCTGGCAGCCGGATCTTTACAACCCGTTGACGATGTTGTTCACCAGCCCGTTCCGGCTGCTGCCGGCCAGGATGGTGCCGCTGGCGTTGAACCTGTTCTCCGCCGTTTGCGCGGCGCTGACCATGGTGCTGCTGGCGCGGTCGGTGATCATTCTCCCGCAGGACCGCACCATGGCGCAACGCCTGCGGGAGCGCAATCCGTTCGCTTTTTTAACCGGCAAATACGCCTGGTTCCCGCCCCTGCTCGCCGTGCTGATGCTGGGCATGCAATTCGGTTTCTGGGTGAACGCCACCAGCTTTACGAGTGAATCGCTGAACCTGCTCATTTTTGCCGTCATCATCTGGCTGCTGCTGGAATTCCGGCTGGATGAACGCGAAGGCCGGCTGACGCTGGCGGCGTTCATTTACGGCGCGGGCATGACGGAAAACTGGGCGCTGATCGGGTTTTTGCCGGTGTTCATCGCCGCCGTTTTGTGGATTCGCGGCCGGGAATTTTTCAACCTGCAGTTCCTCACCCGGATGCTGTTCTGCGGACTGGCCGGACTGTTGTTTTTGCTGCTGCCGCCGGTCGTCGCGAAAATTTCGGGGGATGCGCCTTACAGCATCTTTGTGCTGCTCAAGCCCGCGCTGCAAATGGACTGGGGCATCATCAAGTCCATCAGCATCGGCCAGGTGCGCAATCACCTGCTGCTGATGTCGGTCACCACGTTCCTGCCGCTGCTGGTCATGTCCATCCGCTGGAGCGGCACGTTTGGCGACACCAGCTACGCCGGCAAACTCACCGCCAGCCAGATGTTTCACGTCATTCACGCGGTCGTCTTCGGCGTGTGCCTGTGGATCATGCTGGACCCGCCGTTCAGTCCCGGGCGGCTGGCATTCAATTCCCCGGCGCTGACGTTTTATTACCTGGCCACGCTGGCCATCGGCTATTACTGCGGCTATTTCCTGCTGGTGTTCGGCAAGAAATCAACCACCAGCAAACGCAGCCCGCGGCCGGAGCCGGCCCTGCCCCAGTCGCTGGTCTTTTTGGCGCCGGTCATTTATTGGGGAACTTACGCGGTGGCGGCAATCTTTGCCGCCACATTGGTTTACAAAAACCTGCCTTTGATCTTCAAATTCAACGACGACACGCTGGCGCGTTACGCCAAGGCCACGGTGGATTCCCTTCCCGAAAAAGGCGGCGTGCTGTTGAGCGACGCGGATACGGTCGGCGACAATCCGCTGTCACGCTCGTTGTTGATCCGGGCGGAACTGGCCCGCACCGGACGCGCCCGGGATTTTCTCATGGTGGATACGGCGCAGTTGAAATGGGGTGCCTATTCCCAATACCTTCACAAGGAGGCCCCGGACAAATGGCCGGCGGTTCCCGACAACGCGAAAACGGCCGAATTCAAGGACATCGGCGTTTTGAGCATGCTGACCCAGGTGGCCGCCAGCAACAGCGTTTATTACCTGAACCCCAGTTACGGCTACTATTTTGAAGTGTTCTATCAAGAACCGCACGGCCTGGTTTATGCCATGAACAAACTCCCGGCGGAAACGTTGCTGCCGCCGCCGCTCTCGACCAATCTGGTGGCGGAAAATCAAGCCTTCTGGCATCACGTTATCGAGGAGGACTTCCCGCGCCTGGAACGGGAAACCGCCGCTCCCACCACCGCGTTCAAATACCTGAACCCGGCGCAGAAATTCATCCGCCGCCTGCGGGGACAGTCGCTGCAAAATCCGAACGCGCTGCTGGTTGCCAACCTCTACTCGCGGGCGCTCGACAATTGGGGCGTGGAACTCCAACGCAACGGCCAGCTGGCGGCGGCCGCGACCTGTTTTACGAACGCCACGCGGGTGAATCCGGACAACGTGATCGCCGCCATGAACCTGAATTTCAACCACCAGCTTCAAGCCGGCGACCCCGTGACCATTGACCCCGGCCGGGTGAGCGCCGAGAAGTTTGGCAAATACCGGGATTGGAATGCGGCGCTGAACGCGGACGGACCGGTTGATGATCCCAGCTTTTTGTTCGTCAACAGCGTCCTGGTTTATCGGAGTGGATTGATGCGACAGACGGTTGCCCCGCTCCACCGCATCTGCCAGCTCGCGCCGGATTTTCTGCCGGCCCGCGTCTGGCTGGCCAAAATTTATCTCTACAACCGCCTGGCGGATCGCGCGCTGGAAGTTCTCCACGCTCCCCTGACCCAGCCGGATCGGTTTGCCTTGAACCAGACCAACTCCATCACCGTGAACACCCTGGCCGCCTTTGCGTATCTCCAAAAGAACGAGGTGTCGCGCGGGGCGGATTTGTTGAACCAGGAAATCGCCGTGCATCCGGCCGACACCAACCTGCTCTCCTCCGCCGCCCAGGCGTTCTTCGCCCGCGGCCTTTATACCAATGCGCTCAAGGTGATTGATCTCGCGCTCAACCAACAGCCGGATTCGCCCCAATGGCTGTTTGGCAAGGGCATCGCCTTTCTTCAGATGTCCAACTATGACCAGAGCATTTCATGGATGACCCGCGTGATCAACACCGCCACCAATGACCCCAAAATGCTTGCCAGCGCGCGGTTGAACCGGGCGGCGGCGTATGCCAAAGCCGGCCAGTTGGACCAGGCCCGCGCCGATCTGACCACCCTGCAATCCGCCTACACCAACGCACCGCAGGTCGCTTTTCAACTGGGTGAAGTGGCCGAGCAGCAGCACGACACCAACGAGGCGGTCCGCAACTACCAGATCTTCCTGGCCAATGTGCCCACCAACGCACCGGCCAGCAAAACCGTCCGTGAACGGCTGGACCGGCTCCAGAAATAA
PROTEIN sequence
Length: 985
MPSQNQTELRKQFTQRQLPWVLGGVMLLIYLLTLNHWVTLANLMPVAKVSGFLWQPDLYNPLTMLFTSPFRLLPARMVPLALNLFSAVCAALTMVLLARSVIILPQDRTMAQRLRERNPFAFLTGKYAWFPPLLAVLMLGMQFGFWVNATSFTSESLNLLIFAVIIWLLLEFRLDEREGRLTLAAFIYGAGMTENWALIGFLPVFIAAVLWIRGREFFNLQFLTRMLFCGLAGLLFLLLPPVVAKISGDAPYSIFVLLKPALQMDWGIIKSISIGQVRNHLLLMSVTTFLPLLVMSIRWSGTFGDTSYAGKLTASQMFHVIHAVVFGVCLWIMLDPPFSPGRLAFNSPALTFYYLATLAIGYYCGYFLLVFGKKSTTSKRSPRPEPALPQSLVFLAPVIYWGTYAVAAIFAATLVYKNLPLIFKFNDDTLARYAKATVDSLPEKGGVLLSDADTVGDNPLSRSLLIRAELARTGRARDFLMVDTAQLKWGAYSQYLHKEAPDKWPAVPDNAKTAEFKDIGVLSMLTQVAASNSVYYLNPSYGYYFEVFYQEPHGLVYAMNKLPAETLLPPPLSTNLVAENQAFWHHVIEEDFPRLERETAAPTTAFKYLNPAQKFIRRLRGQSLQNPNALLVANLYSRALDNWGVELQRNGQLAAAATCFTNATRVNPDNVIAAMNLNFNHQLQAGDPVTIDPGRVSAEKFGKYRDWNAALNADGPVDDPSFLFVNSVLVYRSGLMRQTVAPLHRICQLAPDFLPARVWLAKIYLYNRLADRALEVLHAPLTQPDRFALNQTNSITVNTLAAFAYLQKNEVSRGADLLNQEIAVHPADTNLLSSAAQAFFARGLYTNALKVIDLALNQQPDSPQWLFGKGIAFLQMSNYDQSISWMTRVINTATNDPKMLASARLNRAAAYAKAGQLDQARADLTTLQSAYTNAPQVAFQLGEVAEQQHDTNEAVRNYQIFLANVPTNAPASKTVRERLDRLQK*