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berkeley_reactor_200306_planktonic_scaffold_198771_277

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 345686..348181

Top 3 Functional Annotations

Value Algorithm Source
Phospholipase C, phosphocholine-specific {ECO:0000313|EMBL:AEI51775.1}; EC=3.1.4.3 {ECO:0000313|EMBL:AEI51775.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 860.0
  • Bit_score: 968
  • Evalue 4.50e-279
Phospholipase C, phosphocholine-specific n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQM5_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 860.0
  • Bit_score: 968
  • Evalue 3.20e-279
phospholipase C, phosphocholine-specific similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 860.0
  • Bit_score: 968
  • Evalue 9.10e-280

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2496
ATGGATTCACGACGTGATTTTTTAAAAAAAGCGGCCTGGCTCGCGGCGGGCGCCGGTTTTGGCGGTGCGTTGCCCGCTTCGATTCAAAAGGCGTTTGCGATTGATCCGCCGCCGGGCAGCACATTTCTGGATGCGGAACACGTCGTCATTTTGATGCAGGAAAACCGGTCGTTTGATCACACTTATGGCATGTTGCGCGGCGTGCGCGGTTTCAACGATCCGCGTGCGATGACGTTGCCGGATGGCAATCCGGTATGGCTGCAAACCGATGCCGCCGGCGGGACGTATGCGCCGTTCCGGTTGAATCTGCTGGACACGAAAGCCACGTGGATGGGATCGCTGCCGCACACGCGCGAATCGCAGATCGCCGCGTTCCATCACGGCAAACACGACCGCTGGCTGGAGGCGAAGCGCTCCGGCGAAAAGGCATACCGGCATTTGCCGTTGACGCTGGGGTTTTACAACCGCAACGACCTGCCATTTTATTACGCGCTGGCGGATGCGTTCACGATCTGCGACCAGAATTTTTGTTCCGCCATGACCTGCACCACGCCGAATCGCCTTTATCTCTGGTCGGGCACGCTGCGCGCCGAACAAGCCATTTCGGCGAAGGCGAATTTGACCAACGAAGACGCGGATTTTGATTCGGAAGTGAACTGGGCGACGTTTCCCGAGCAACTGGAAAAACACGGCATTTCCTGGCGCGTTTATCAGAACGAAATTTACCTGCCGACCGGATTTCACGGCGAAGAAGAACCGTGGCTGTCCAATTTCGGCGATAATCCGCTGGAATATTTCAAACAATACAATGTGCGATTTTCCGCCACCCGCCAAGCACACCTGGCGGATCTCAAAAAAACTTTGGTCGCCGAACTGGAAAAATTAACCAAGCAAACGCCGCCGCCGGAAAAACAAATCGCGGAAAAACGGCACCAGCTTGATCAGATCGAGCAAGAACTGACGACCTATAACGCCGATGCGTTTGCCAGGTTGTCCGCGGAACAAAAAAACCTTTTTGCAAAGGCGTTCACGACCAACGTCGAGGATCCGGATTATCGCGAACTCACCACGACGACTTACCAGGATGGCCCGCGCGAACGTCAGATGCAAATTCCCAAGGGCGATGTGCTGCATCAATTCCGCCAGGACGTGCGCGCCGGCAAATTGCCGGCCGTTTCGTGGATCGTGCCGCCGGAACGCTTTTCCGATCATCCGTCCTCGCCGTGGTATGGCGCGTGGTATCTCTCGGAAGTGTTCGACATCCTCACCCAAAATCCCGAGGTCTGGCGCAAGACCATTTTCATTTTGTGCTATGACGAAAACGACGGCTATTTCGATCATGTGCCGCCGTTCATTCCGCCGCATCCGAATCATCCTGAAACGGGCAAAGTTTCCGCCGGCCTGGACACGTCCGTGGAACAAATCAGTCCCGCACAGGAAAAAATCTACGCGTCGCATCATCGCGACACGGTTTCCACGCCGATCGGTTTGGGCTTCCGCGTGCCGTTGCTGGTCGCGTCGCCGTGGAGCCGCGGCGGCCGCGTTTGTTCGCAGGTGTTTGATCACACTTCGGTTCTGCAATTCCTGGAAACCTTTTTAAGCCATAAGACCGGCCGGACCGTGCGCGAAGCCAACCTCAGCGAATGGCGGCGGACGATTTGTGGCGATTTGACCTCGGTCTTCCGTCCCTATGCGGGTGAAAAAATCGCGCTGCCGGAACCGGTCGAACGCGAACCATTTCTGACCGCCATCAACCGTGCGCAATTTCGCCCGGTGCCGGCTGCTTTCAAGAAGTTGGATGCGGCGCAAATTGCGCAAGCGCGGGAAAATCCGCGGGCCATTGCCTGTCTCGCGCGGCAGGAACCCGGCACCCGCATCGCCTGCGCGTTGCCGTATGAATTGGCGGCGGATGGCAAATTAAGCGCTGATCGGAAAACCTTCGCCGTTCGCTTCGCGGCGGGGAACACCTTGTTCGGCGCGCGCGCGGCCGGAGCCCCGTTCCGCGTTTATGCGCCGGGAAAAGTCAGGGCAGTTAATGGCCAATTGGAGAGCGGACGCTGCTGGAATTACGCCGTGAGGGCGGGCGACCATCTGGTTGACGCCTATCCGCTGAACGATTTTGCGGACGGCATTTATCATCTGCAACTGACCGGGCCGAATGGATTTTATCGCGAGTTTCGCGGCACGGCAGACGATCCGCGATTGGAACTGGCCTGGTTGCCGGTGGATGAAACTGGCGTTATCCGGCTGACAAATCACGACACTCAAAAATCGCGGGTTGTGACGATTGAGGACATGGCGTATGGCGACCGCCGGCGCACGGTGAAGCTGCGCCCGTTGGAAGTGCGGGAGATCGCCTTTGACCTGGGACCAAATCATGGCTGGCACGACTGGCGGATCCGCGTGGAAGGCGCGCCGGAATTTGAACAGCGTTACGCCGGGCACCTCGAAACCGGCCGGGAAAGCTCCAGCGATCCCGCGATGAACAAAGTGTAA
PROTEIN sequence
Length: 832
MDSRRDFLKKAAWLAAGAGFGGALPASIQKAFAIDPPPGSTFLDAEHVVILMQENRSFDHTYGMLRGVRGFNDPRAMTLPDGNPVWLQTDAAGGTYAPFRLNLLDTKATWMGSLPHTRESQIAAFHHGKHDRWLEAKRSGEKAYRHLPLTLGFYNRNDLPFYYALADAFTICDQNFCSAMTCTTPNRLYLWSGTLRAEQAISAKANLTNEDADFDSEVNWATFPEQLEKHGISWRVYQNEIYLPTGFHGEEEPWLSNFGDNPLEYFKQYNVRFSATRQAHLADLKKTLVAELEKLTKQTPPPEKQIAEKRHQLDQIEQELTTYNADAFARLSAEQKNLFAKAFTTNVEDPDYRELTTTTYQDGPRERQMQIPKGDVLHQFRQDVRAGKLPAVSWIVPPERFSDHPSSPWYGAWYLSEVFDILTQNPEVWRKTIFILCYDENDGYFDHVPPFIPPHPNHPETGKVSAGLDTSVEQISPAQEKIYASHHRDTVSTPIGLGFRVPLLVASPWSRGGRVCSQVFDHTSVLQFLETFLSHKTGRTVREANLSEWRRTICGDLTSVFRPYAGEKIALPEPVEREPFLTAINRAQFRPVPAAFKKLDAAQIAQARENPRAIACLARQEPGTRIACALPYELAADGKLSADRKTFAVRFAAGNTLFGARAAGAPFRVYAPGKVRAVNGQLESGRCWNYAVRAGDHLVDAYPLNDFADGIYHLQLTGPNGFYREFRGTADDPRLELAWLPVDETGVIRLTNHDTQKSRVVTIEDMAYGDRRRTVKLRPLEVREIAFDLGPNHGWHDWRIRVEGAPEFEQRYAGHLETGRESSSDPAMNKV*