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berkeley_reactor_200306_planktonic_scaffold_226867_11

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(18672..20396)

Top 3 Functional Annotations

Value Algorithm Source
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 569.0
  • Bit_score: 889
  • Evalue 1.40e-255
Dihydroxy-acid dehydratase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMQ4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 569.0
  • Bit_score: 889
  • Evalue 1.00e-255
ilvD; dihydroxy-acid dehydratase similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 566.0
  • Bit_score: 798
  • Evalue 8.60e-229

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1725
ATGAAAAAAATGGCCAACGCGAACCACACACGCCCGCATTCCAGCAAAGTTTTCGACGGGGACGAACGCGCCGCCGCCCGGGCAATGCTTTATCCGGTCGGCTTCCAGCGCGAAGATTTCAAAAAGCCGCTCATCGGCATCGCCTCCACGTGGAGCGATGTGACTCCGTGCAACATGCATCTGGACAAGCTCGCGCGCGAAGCTGAAAAAGGCGCCAACGAAGGCGGCGGCAAGGCGATGGTTTTCAACACCATCACCGTGTCCGACGGCATCTCGATGGGCACCGAAGGCATGAAGTATTCGCTCGTCTCGCGCGAAGTCATCGCCGATTCCATCGAAACGGTCGTGGGCTGCGCCGGCATGGACGGGTTCGTGGCCATCGGCGGTTGCGACAAAAACATGCCCGGCGCCCTCATCGCCATCGCGCGCCTGAACCGCCCGGCCGTGTTCGTTTACGGCGGCACCATTTTGCCCGGCTGTCTCACCAACGATCCGCGGCGCAAGCTGGACATTGTTTCCGTGTTTGAAGCCATCGGCGCGCATGCGAACAAACAGATTTCCGACGAAGAATTCCATGCCGTCGAACGCTGCGCCATTCCCGGCGAAGGTTCGTGCGGCGGCATGTATACCGCCAACACGATGGCCAGCGCGATTGAAGCGCTTGGCATGAGCCTGCCGAACAGTTCCGCGCAAAACGCCGTTTCGCCCGCGAAATTGAACGACTCCCGCCGGGCCGGCGCCGCCGTCGTGAACCTGTTGGAACAGGGCATCAAGCCGCTCGACATCCTCACGAAAAAGGCGTTTGAAAACGCCATCGCCGTCGTCATCGCGCTCGGCGGCTCGACGAACGCGGTGCTGCATCTGCTCGCCATCGCGCACGCCGCGAAGGTCAAATTGACGATTGACGATTTCACGCGCATTGGCAAACGCGTGCCCGTGCTCGCCGACCTGAAGCCCAGTGGAAAGCATTTGATGAGCGAACTCGTGGCCATCGGCGGCATCCGTCCGCTGATGAAGATGTTGCTCGACAAAAAACTGCTTCACGGACATTGCCTCACGGTGACCGGCAAGACGCTGGCCGAAACGCTGGCGGAAGTGCAACCGTATCCAGCAGGCCAAACCATCATTCGCGGCTTCGATCAGCCGATCAAAAAGACCAGCCACCTCGTCATCCTGCGCGGCAACCTCGCGCCCGATGGCGCGGTGGCCAAAATCTCCGGCAAGGAAGGATTGCGTTTCGCGGGCAAGGCGATTGTTTTTGAAGGCGAAGAAAAGGCGTTGAAGGCGATTCTCAACGGCACCGTGAAAGCCGGCCATGTTGTCGTCATCCGCAGCGAAGGCCCCAAAGGCGGGCCGGGCATGCGCGAAATGCTGTCGCCCACCAGCGCCATCATGGGCAAGGGTCTCGGCCAGGAAGTCGCGCTCATCACCGATGGCCGGTTCAGCGGCGGCAGCCACGGCTTTGTGGTCGGCCACGTCACCCCGGAGGCCTGTCTTGGTGGTCCGATTGCCCTGGTCAAAAACGGCGACCCGATCACGATTGACGCCGAGCAACGAACCATCACGCTCGGCATTCCGGCCAGGGAATTGGCGGCCCGCCGCAAGAGTTGGAAGCAGCCAAAGCCCCGTTACACCCGCGGCGTGCTGGCCAAATACGCCCACACCGTCCGCACCGCCAGCGAAGGCGCGGTGACGGACCACGATTTAACCCAAACTCCGAAATAG
PROTEIN sequence
Length: 575
MKKMANANHTRPHSSKVFDGDERAAARAMLYPVGFQREDFKKPLIGIASTWSDVTPCNMHLDKLAREAEKGANEGGGKAMVFNTITVSDGISMGTEGMKYSLVSREVIADSIETVVGCAGMDGFVAIGGCDKNMPGALIAIARLNRPAVFVYGGTILPGCLTNDPRRKLDIVSVFEAIGAHANKQISDEEFHAVERCAIPGEGSCGGMYTANTMASAIEALGMSLPNSSAQNAVSPAKLNDSRRAGAAVVNLLEQGIKPLDILTKKAFENAIAVVIALGGSTNAVLHLLAIAHAAKVKLTIDDFTRIGKRVPVLADLKPSGKHLMSELVAIGGIRPLMKMLLDKKLLHGHCLTVTGKTLAETLAEVQPYPAGQTIIRGFDQPIKKTSHLVILRGNLAPDGAVAKISGKEGLRFAGKAIVFEGEEKALKAILNGTVKAGHVVVIRSEGPKGGPGMREMLSPTSAIMGKGLGQEVALITDGRFSGGSHGFVVGHVTPEACLGGPIALVKNGDPITIDAEQRTITLGIPARELAARRKSWKQPKPRYTRGVLAKYAHTVRTASEGAVTDHDLTQTPK*