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berkeley_reactor_200306_planktonic_scaffold_220752_69

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(86748..87080)

Top 3 Functional Annotations

Value Algorithm Source
Thioredoxin n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBW4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 110.0
  • Bit_score: 165
  • Evalue 2.50e-38
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 110.0
  • Bit_score: 165
  • Evalue 3.50e-38
trxA; thioredoxin similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 104.0
  • Bit_score: 141
  • Evalue 8.40e-32

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 333
ATGGCTTCTCCTTTGATCGTTACCCTCACGCAGGACAATTTTGAAAACGAGGCGCTGAAATCCGCCACGCCGGTGCTGGTGGATTTCTGGGCCGAATGGTGCGGACCGTGCAAGATGATTGCGCCCGTGCTGGATGAACTCGCCACGGAATACGATGGCAAGGTCAAGATCGGCAAGGTCAACATTGACGAACATCAGGGCCTCGCCGCGCAGTTTGGCGTTCGCGCCATCCCCACATTGCTGGTGCTCAAAAACGGGCAGGTGGCCGAACAAATGGTCGGTGCCAAAAGCAAGCGCGATTTAAAAGCCAGCCTCGATCGCGCCACGGCCTGA
PROTEIN sequence
Length: 111
MASPLIVTLTQDNFENEALKSATPVLVDFWAEWCGPCKMIAPVLDELATEYDGKVKIGKVNIDEHQGLAAQFGVRAIPTLLVLKNGQVAEQMVGAKSKRDLKASLDRATA*