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berkeley_reactor_200306_planktonic_scaffold_220752_124

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 147135..148355

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRE4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 381.0
  • Bit_score: 307
  • Evalue 2.00e-80
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEF57578.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 381.0
  • Bit_score: 307
  • Evalue 2.80e-80
secretion protein HlyD family protein similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 391.0
  • Bit_score: 279
  • Evalue 1.20e-72

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1221
ATGAGCAACGACATGGCTGCCGCCGCACCCCGGGAGACGGGCGCCGGGGGAGGCGGATTGAGTTCTCCGAAATTCCTGTGGCCCGCCGGCATCGTCCTGGCCGGGCTGCTGTTCATCGGCTTTTACGTGCTGGTGAAGGTGCTCACGCACGAATCCACCGACGACGCATTCATCGCCGGCCACATCATTTCGATCGCGCCGCGCGTGGCCGGGCAGGTGTCCGCCGTGTATGTGAAGGACAACGAGCTGGTGCATTCCAACGACCTGCTGATCGCGCTGGACCCGACGGATTACGCCACGACGCACGCGCAGAAGGAATCCTCCGCCGCGGCGCAGACCGCCAATTACAATACGGTGCTGGCCGCGTTGAAATTGATGGAAGCCAAGGTGGCCACCGCCAAAGCGGTCGCCCGCGAATCCAAGGCGGACGCCGATGCGGCCGCCGCCACATCCGCCCGGGCGAAGGCGGATTTTGCGCGCGCCCAGGATTTGCGGAAACAGAACACCATTTCCGCGCAGGAATTCGACGTCGCCCAGGCCGCGGCGGAGGAGGCCGCTGCCAACCTGAATTCCGCGAAGGAAAAGGCGGATGCCGACCAGTCGAAAGTCGGCGAGGCGGCGGCGCAGTTGAACGCGGCCCAATCCGCGGTTTCCATGGCGCTGGCGCAGGCGGATTCGGCGCAGAAGACCGCCGAGTCGGCCAAACTGGATTTGTCCTACACCAAAATCTACGCGCCGGCGGACGGCCGCGTGACCCAAAAATCCGTCGAACCGGGCGATTACCTGCAAGCGGGCCAGCAAGTTCTGTCCCTGGTGCCGTCGGAAGTCTGGGTGGTGGCCAATTTCAAGGAATCGCAACTGGAGGACATGGCGCCCGGCCAGCCCGCCACGGTGGCCGTGGACGCCCTGGGCGGCCGCAAGTTTCGCGCGCACGTGGACAGCATCCAGGCCGGCAGCGGCGCGCAATACAGTTTGTTGCCGCCGGAAAACGCGACGGGCAATTTCGTGAAGGTCGTCCAGCGCGTGCCGGTGAAAATCGTGTTCGACGAACCGTTGCCGGCGGACAAGGTCATCGGCCCTGGTCTGTCGGTGATTCCCAGTGTGCAGACCAGCAAATTCACGTTTCCGGTTTGGGCCATGGCGGTCATCGCGGTCGTGGTGGCGGTCATCGCAATGTTCAGCTTCAGGTCATTCATTTCGCGAAAAGCCCCGGGGAAATAA
PROTEIN sequence
Length: 407
MSNDMAAAAPRETGAGGGGLSSPKFLWPAGIVLAGLLFIGFYVLVKVLTHESTDDAFIAGHIISIAPRVAGQVSAVYVKDNELVHSNDLLIALDPTDYATTHAQKESSAAAQTANYNTVLAALKLMEAKVATAKAVARESKADADAAAATSARAKADFARAQDLRKQNTISAQEFDVAQAAAEEAAANLNSAKEKADADQSKVGEAAAQLNAAQSAVSMALAQADSAQKTAESAKLDLSYTKIYAPADGRVTQKSVEPGDYLQAGQQVLSLVPSEVWVVANFKESQLEDMAPGQPATVAVDALGGRKFRAHVDSIQAGSGAQYSLLPPENATGNFVKVVQRVPVKIVFDEPLPADKVIGPGLSVIPSVQTSKFTFPVWAMAVIAVVVAVIAMFSFRSFISRKAPGK*