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berkeley_reactor_200306_planktonic_scaffold_228973_35

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 33463..33846

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIW7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 121.0
  • Bit_score: 186
  • Evalue 1.20e-44
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 121.0
  • Bit_score: 186
  • Evalue 1.70e-44
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 127.0
  • Bit_score: 150
  • Evalue 2.70e-34

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 384
ATGCGCGTAACCAATTCCCCCGCTTCCCGCAAACGCCGCGGAAGAATGCTGACCGCCGCCAAAGGCTACCGCCTCAAGCGCTCCAAACTCTATCGCTATGCGTCCGACGCCGTGGATCATGGCCGGCAATACGCCTACCGCGACCGTCGCACCAAAAAGCGCACGTTCCGCTACCTCTGGCAGATCCGCATCAACGCCGCCGCCCGCGAAGCCGGTTTGACCTACAGCCGCTTCATGGAAGGTCTCAAGGCCGCCAAGTGCGAACTGGATCGCAAGGTCATCGCCGACATCGCCGCGACCGATAACGCCGCGTTTATTGAAATCGTCAATGTGGCTAAGAACGCGCTGAAAGCCAAGCCCGCCGCGACCCTGGCCAAAGCCTGA
PROTEIN sequence
Length: 128
MRVTNSPASRKRRGRMLTAAKGYRLKRSKLYRYASDAVDHGRQYAYRDRRTKKRTFRYLWQIRINAAAREAGLTYSRFMEGLKAAKCELDRKVIADIAATDNAAFIEIVNVAKNALKAKPAATLAKA*