ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_228973_49

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(46238..48241)

Top 3 Functional Annotations

Value Algorithm Source
Zn-dependent protease with chaperone function n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DMF9_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 674.0
  • Bit_score: 533
  • Evalue 2.10e-148
Zn-dependent protease with chaperone function similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 674.0
  • Bit_score: 533
  • Evalue 6.00e-149
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 671.0
  • Bit_score: 560
  • Evalue 3.00e-156

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB12_FULL_Lentisphaerae_65_16_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 2004
ATGGATTTCTTTGCGCAACAGGACAAAGCCCGCCGCCAAACCAAGTGGCTGGTGCTCTACTTTGTGCTGGCGGTGGCGCTGCTCATCGTCGCCGTTTATTTCGTGGCGTTGATTGCGTTTGCCGGCGTCCAGCTCAAGCAGCACCAGGGCTATAATTACCAAGCCGCGCCGCTGCATCTCTCGCTGTGGAATCCCAAAGTTCTGTTCGGCGCGGTGCTTGGCGTGCTCGCGGTCATCACTTTGGGCAGCGCTTACAAGATCAATGAGCTTTCCGCCGGCGGCAGCGTGGTGGCCACGTTGATGGGCGGGCGCTTGATCAAGCAGGACACCGCCGATCCCAACGAACGCAAGCTGCTCAACGTGGTCGAGGAAATGTCCATCGCCTCCGGCGTGGCGATGCCGCAGGTTTACGTCATGGACCGCGAACAGGCCATCAACGCCTTTGCCGCCGGACATTCCACGGGCGACGCCGCCATCGGTGTGACGCGCGGCTGCATTGAACTGTTGTCCCGCGACGAATTGCAGGGCGTCATCGGCCACGAATTCAGCCATATTTTGAACGGCGACATGCGGCTGAATCTCCGGCTCATCGGCATCATCTTTGGTTTGCTGTGTCTCGCCACCATTGGTCGCATTTTGCTTTACGCGCGCAGCGGCAACAGTCGTGATCGCAACAACGCCCTGCCGCTTTTCGGCTTGGCGCTGATTGTTCTGGGCGGCATCGGCGTGTTTTTTGGCCGGCTGATTCAAGCCGCCGTCAGCCGGCAGCGCGAATTTCTGGCGGACGCTTCCTCGGTGCAGTTTACCCGCAATCCCGGCGGACTTTCCGGCGCACTCCAGAAAATTGGCCGTTACAGCTACGGTTCCAAATTGCAATCCGAACACGCCCCCGACCTGTGCCACATGTTTTTCGGCAACGGTCTCGGCAACGCCATGTTTGGTTCCATGGCCACGCATCCGCCCATTCCCGATCGCATCCGCGCCATTGATCCCAACTGGGACGGAAAATTTCCGCCGCTTAAAGAGGAACAGAAAGAAACCGTCCGCCGCGCCGCGCTTTCCGAATTGCAGTCGTCCCGCCGTCCGCCGATGCCGGAAATCCTCGGCGCCGTTCTGACGGGTGCTGCCGTTGATCAAGGCGCCAACCGCAATCCCGGCGTGCGCGCGGACGACGTGGTTCCGCACTTGGGCAACCCAACGCCGCTGCACCTGAAATACGCCGAGGCATTGCGCGATGCGATGCCGGATAATTTGCGCATCGCGGCGCGCGATCCGCTGGGCGCTTCGGCTTTGATTTATGCGTTGCTGTTGAGTGCGGATGCATCGCTGCGGACGCGACAACTGGCGGAAATCCAGCGCCGCGCGGGCGACGCAGTTTCTCAACAAACCGCCGCACTCGGGCCGGAGGTTGCCGCCGTGGCCAAACGCGCCCGGTTGCCGCTCGTCAATGTCGCGATCGGTTCCCTGCGGAATCTTACCGCCGATCAATTTCAACAGTTTTCCGGAACGTTGGCCTGGCTCACCCAGAGCGACCAAAAAATCGAGCTGTTTGAATTCGTGCTGCAAAAGATCGTCTTGCATCACCTCACGCCGAAGTTCAGCCAGCAGCGGCCGCCGAACGTGCAGTTATACACGCTCAAGCCGCTGGTGCCGGATTGCTCGGTCATCCTGTCCGCGCTGGCCTACGCCGGGAGCGATCATGATGGCGAGATTCAAAAAGCCTTCACCACCGGCGCGCCATTTCTGCGCGCGCCCATGTCGGCCCAACCTGTTTTGCTGCCGCGCGAACAATGCGGCGTGACCGCGCTGGATGCCGCCCTGGACCGGCTGGTGTTGTCCGTGCCCATCATCAAGAAAAACCTGCTCGAAGCCTGCGCCCGCGTCGTCGGCGCCGACGGCGTGATTCTGGAAGCCGAAGCCGAACTGCTCCGCGCCGTCGCCGACACGCTGGATTGTCCGCTGCCGCCGCTGGGCGTGACCGAAAATCAGCAGGGGACGAAGTGA
PROTEIN sequence
Length: 668
MDFFAQQDKARRQTKWLVLYFVLAVALLIVAVYFVALIAFAGVQLKQHQGYNYQAAPLHLSLWNPKVLFGAVLGVLAVITLGSAYKINELSAGGSVVATLMGGRLIKQDTADPNERKLLNVVEEMSIASGVAMPQVYVMDREQAINAFAAGHSTGDAAIGVTRGCIELLSRDELQGVIGHEFSHILNGDMRLNLRLIGIIFGLLCLATIGRILLYARSGNSRDRNNALPLFGLALIVLGGIGVFFGRLIQAAVSRQREFLADASSVQFTRNPGGLSGALQKIGRYSYGSKLQSEHAPDLCHMFFGNGLGNAMFGSMATHPPIPDRIRAIDPNWDGKFPPLKEEQKETVRRAALSELQSSRRPPMPEILGAVLTGAAVDQGANRNPGVRADDVVPHLGNPTPLHLKYAEALRDAMPDNLRIAARDPLGASALIYALLLSADASLRTRQLAEIQRRAGDAVSQQTAALGPEVAAVAKRARLPLVNVAIGSLRNLTADQFQQFSGTLAWLTQSDQKIELFEFVLQKIVLHHLTPKFSQQRPPNVQLYTLKPLVPDCSVILSALAYAGSDHDGEIQKAFTTGAPFLRAPMSAQPVLLPREQCGVTALDAALDRLVLSVPIIKKNLLEACARVVGADGVILEAEAELLRAVADTLDCPLPPLGVTENQQGTK*