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berkeley_reactor_200306_planktonic_scaffold_228973_62

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(67703..68614)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretory pathway pseudopilin PulG-like protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCZ5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 274.0
  • Bit_score: 257
  • Evalue 1.30e-65
Type II secretory pathway pseudopilin PulG-like protein {ECO:0000313|EMBL:EEF62341.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 274.0
  • Bit_score: 257
  • Evalue 1.90e-65
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 30.4
  • Coverage: 293.0
  • Bit_score: 96
  • Evalue 8.50e-18

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 912
ATGAAGCCCGTTGACACCTCGCGCTCCGCCTTGTCGTCGCGCGGACCTGGCCCCGCTATTTCGTCCGTGGGAAAATCCACGTTTTTCCGCGGGGGCACGGCCAAATCCGGCGCGGCTCGGCGACGCTTCCGGGCGGCGGGCCGGCCGGGGTTCACCCTGATCGAATTGCTGGTGGTCATTGCCATCATCGCCATCCTGGCCGCCTTGCTGCTGCCGGCGCTGGCAAAGGCCAAGAACCGGGCTGACCGGATTTCCTGTTTGAACAACCTGCGGCAGATCGGGCTGTTCATGCAATTATACACGGACGACAATCATGATTTTTTTCCCGCGCACCGGGACATGGTGCCGCTGGCGCCGGGCGGCGATCCGTTGACAAACTGGTGGGGGCAATACGTCGTGACCTACGGCGGCGGCAAATCCAATTTGTTCCATTGTCCGGCCATCAAGACGGCGCAGCAAAACGGTGGCTTTGACTGGGCGTTCAACCGCGACAAGGTGGGTTACGGTTTCAATTCCTATTTTCTCGGAGCGTATCCGCAGCCGACCACGATTGATAACGTCTCCATCGGATCGTTTCATTACACGCCGAATCCGTGGTTCAAGCGAACCAACCTCAAGCGGCCGACGGACACCCTGGAAATTTGCGATTCCAATCCCAAACCGGTCAGCGGTGCGGACAGTTATTCGTGCTGGTGGCCGAAAGCGGCCGAGGGCGCCGGCGGAACTGACAAGGAGGGGGTTTACACCCTGCGCCATGATCCCGCGGGCAACGTCGTGTTTACGGACGGCCACGCCGAATCGCGCAAGGATGCGCACATCAATCCGCCCCAAAACCCGCTGGCGGGCGGAAGTGCGCAAGCGCTGGACAACTCCCGTTTCTGGGATCCGCTTCAGCGCGCCGGCGACCGCTAA
PROTEIN sequence
Length: 304
MKPVDTSRSALSSRGPGPAISSVGKSTFFRGGTAKSGAARRRFRAAGRPGFTLIELLVVIAIIAILAALLLPALAKAKNRADRISCLNNLRQIGLFMQLYTDDNHDFFPAHRDMVPLAPGGDPLTNWWGQYVVTYGGGKSNLFHCPAIKTAQQNGGFDWAFNRDKVGYGFNSYFLGAYPQPTTIDNVSIGSFHYTPNPWFKRTNLKRPTDTLEICDSNPKPVSGADSYSCWWPKAAEGAGGTDKEGVYTLRHDPAGNVVFTDGHAESRKDAHINPPQNPLAGGSAQALDNSRFWDPLQRAGDR*