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berkeley_reactor_200306_planktonic_scaffold_228973_63

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 68722..69852

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029A1CA3 similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 372.0
  • Bit_score: 402
  • Evalue 3.20e-109
Regulatory protein GntR HTH {ECO:0000313|EMBL:EDY22146.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 367.0
  • Bit_score: 402
  • Evalue 4.50e-109
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 370.0
  • Bit_score: 374
  • Evalue 2.60e-101

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1131
ATGTCCCCCGAACCCAAACACAAGCACCTGGAAATTTCGCGGCATTTGCTGACCGAAATCGCCGCCGGAAAATATTTGGCCAACGGCAGGCTGCCGAGCGAGGCGCAACTGGTCGGCCAGTTCAAGGTTTCCCGCCCCACGGTGGCCCGCGCGCTGCGCGACTTGATGGCGGAGGGAATCATTGAGCGCCGCGCCGGCTCCGGCTCCTTCATCCGCAACCGGACGGGCACGCCGCCGACCACCCGCCAGATCGGCCTGCTGATTCCAGGATTGGGCACCACCGAAATCTTTGAAATCATCTGCGGCGAACTGGCCAGCCTCGCGCGGCGGAGCGAATACACTTTGTTGTGGGGCGGCTCATCGCATCCGCGTTTGGATCAGGATGGCAGCCGCGAGCACGCGCGGGAAATTTGCGAGCAGTTCATCGAACGCAAGGTGACCGGCGTGTTTTTCGCCCCGTTCGAACTCACCGTCGGCCAGGACGAGATCAATCGCGATATTTCCGACCGTTTCAGCGAGGCGGGCATTCCCGTCGTGTTGCTCGACCGCGATCTGGCGCCGTTCCCGCACGGCGGGCATTTTGATGTGATCGGACTCGACAATGTCGCCGCCGGTTATTTGATTGCGGAACACCTGATCAAACTCGGCTGCCAGCGCGTCGCCTTTGTCACCCGCCCGCTCTCGGCCCCGACCGTGGAACGTCGCATCGCCGGCGCCCGCGAGGCCCTGGACAACCACAAGATCGAGTTGGCTCCCAACTGGGTTCAGACCGGCGATCCGCAGGATGAAAAATTTGTCCGCTCGCTGATGGCCGGCAAACGCTGGGATGCGTTCATCGGCGCGAACGACCTGACCGCTGCGCAGTTGATCCGCACCATCGAAAAAAGCCGGTTCAAAGTTCCCCGGGACGTTCGCGTGGTGGGGTTCGACGACGCCAAATACGCGACGCTCGTCAGCGTTCCGCTCACCACCATTCAACAACCCTGCCGCGACATGGCGATTGTGGCGTTTCAGACGATGCTCAGCCGCATTGCCGATCCCACGCTTCCCGCACGCAACATTCTACTTCCACCGCGACTGGTTGTCCGCGAATCGTGCGGCGCGTATCTGCCGCGCAAAGCCAGGCCGTAA
PROTEIN sequence
Length: 377
MSPEPKHKHLEISRHLLTEIAAGKYLANGRLPSEAQLVGQFKVSRPTVARALRDLMAEGIIERRAGSGSFIRNRTGTPPTTRQIGLLIPGLGTTEIFEIICGELASLARRSEYTLLWGGSSHPRLDQDGSREHAREICEQFIERKVTGVFFAPFELTVGQDEINRDISDRFSEAGIPVVLLDRDLAPFPHGGHFDVIGLDNVAAGYLIAEHLIKLGCQRVAFVTRPLSAPTVERRIAGAREALDNHKIELAPNWVQTGDPQDEKFVRSLMAGKRWDAFIGANDLTAAQLIRTIEKSRFKVPRDVRVVGFDDAKYATLVSVPLTTIQQPCRDMAIVAFQTMLSRIADPTLPARNILLPPRLVVRESCGAYLPRKARP*