ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_228973_67

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(76957..77469)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein id=24515465 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 38.5
  • Coverage: 169.0
  • Bit_score: 116
  • Evalue 2.10e-23
Putative uncharacterized protein {ECO:0000313|EMBL:EDY80441.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 165.0
  • Bit_score: 108
  • Evalue 6.00e-21
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 163.0
  • Bit_score: 64
  • Evalue 2.60e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Verrucomicrobiae bacterium DG1235 → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 513
ATGGCGATGAACGACGCCGTTGACCAGCTTTGCCCGAAGTGCGGTTTGTGCTGCGACAGCACGCTTTTTGCCGACGTGGAGTTGCGGGCGGGGGATGATCCCGGGCGGCTGCAAGCGCTGGGGTTGGTGGTCGAACAAAAGACCCGGACAAAGCTGGCCTTCGCCCAGCCGTGCGCGTGTTTTGACGGCGGGCTGTGCGGCATTTACGGAGCGCATCCCCAACGTTGCCGGTTGTTTGAATGTGGTTTGTTGAAGCGGGTCAAGGCCGGCCGGATGAAGCCGGCGGCGGCGCTGAAAAAAATTTCCGGGGCGAAGCGGCGGGCGGAAAAAGTGCGCGAGTTGCTGCAGTTACTGGGGCAACGCGACGAGGCGATGGCGATGACGCATCGTTACGCCGAGGCGATGGCGGCGCCGGTGGATTTGTCGGATGACCGGGGCGTGGAACATCACGCCGCGCTGATGCTGGCGGTGAATGAGTTGATGGACCAGTTGGAGCGGGATTTTCTGCGGTGA
PROTEIN sequence
Length: 171
MAMNDAVDQLCPKCGLCCDSTLFADVELRAGDDPGRLQALGLVVEQKTRTKLAFAQPCACFDGGLCGIYGAHPQRCRLFECGLLKRVKAGRMKPAAALKKISGAKRRAEKVRELLQLLGQRDEAMAMTHRYAEAMAAPVDLSDDRGVEHHAALMLAVNELMDQLERDFLR*