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berkeley_reactor_200306_planktonic_scaffold_228973_69

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(80120..81223)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57) similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 361.0
  • Bit_score: 307
  • Evalue 3.90e-81
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_01445}; EC=2.3.1.234 {ECO:0000255|HAMAP-Rule:MF_01445};; N6-L-threonylcarbamoyladenine synthase {ECO:0000255|HAMAP-Rule:MF_01445}; Short=t(6)A synthase {ECO:0000255|HAMAP-Rule:MF_01445};; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000255|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000255|HAMAP-Rule:MF_01445}; TaxID=324925 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.2
  • Coverage: 361.0
  • Bit_score: 307
  • Evalue 1.90e-80
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=TSAD_PELPB similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 361.0
  • Bit_score: 307
  • Evalue 1.40e-80

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Taxonomy

Pelodictyon phaeoclathratiforme → Pelodictyon → Chlorobiales → Chlorobia → Chlorobi → Bacteria

Sequences

DNA sequence
Length: 1104
ATGACCCTGCTCGCGCTCGAAACCTCCTGCGACGAAACCAGCGCCGCCGTGGTGCGCGACGGCCAGGTCCTGTCCAACGTCGTTTCCTCGCAAATCAAACTGCACGCCGAATACGGCGGCGTCGTGCCCGAACTCGCCGCCCGCGAGCATCTTAAAAATCTTTCGCCCGTCGCGCACTCCGCATTGAGTGCCGCCGGGATTTTCCCGCAACAACTGGACGCCCTCGCGGCGACCCAAGGACCGGGTTTGCCGACCGCCTTGCTCGTCGGCTTGAAGGCCGCGCAAGCGATGGCGTTCGCATTGAACAAGCCGTTCATCGGCATCAACCATCACGAAGCGCATCTTTATTCGCCGTGGATCGAATCAACCGAGGCGTGTTCTTTCGTGTCTCCCTCTCCTTTCAACGGAGAGAAGGGTGGCAACTTGCAAGCCGCTTCGCCTTCCAAAACAGGGTCCGCCAACTTCACCGCTTTCCAACCCAACATCTCACTGATCGTCAGCGGCGGTCACACGATGCTGGTGCTGGTGGAATCCGAATTGAAACATCGCGTGCTCGGCGGCACGATTGACGACGCCGCCGGCGAATGCTTCGACAAGACCGGCAAGCTCATGGGGCTGGCGTATCCCGCCGGCCCGGTCATTGACCGGCTCGCAGAGCAGGGGAATCCCGCCGCCTACGATTTTCCACGCCCGCTGCTGCGCGATGCCAATGACGATTTCAGCTTCAGCGGTTTGAAAACCTCCGTGCGTTATTTCATCCGCGACCATCCGACCTTGCTCGATGACCGCCAGCAAGTCTGCGACCTCTGCGCCAGCGTGCAGGCGGCGATTGTGGAGGTGCTCGTCAAGAAGACCATCCGCGCCGCGAAGCGGGAAGGGGTTCGCTGCGTGACCGCGTCCGGCGGCGTGACCTGCAACCACGCGCTACGCAAGGAACTTGAACGCGCCTGCAAAAAGAACGGCTTCACGCTCCGGCTCGCCGAAAAGAATCTTTGCACCGACAACGCGGCCATGATTGGCATTTTGGCAGAGCGAAAACTGCGGGCCGGTCTCCCGGCAACGTCGCTGGACGAGGAAATCAAACCCGGCTGGGCGCTGGCGTAA
PROTEIN sequence
Length: 368
MTLLALETSCDETSAAVVRDGQVLSNVVSSQIKLHAEYGGVVPELAAREHLKNLSPVAHSALSAAGIFPQQLDALAATQGPGLPTALLVGLKAAQAMAFALNKPFIGINHHEAHLYSPWIESTEACSFVSPSPFNGEKGGNLQAASPSKTGSANFTAFQPNISLIVSGGHTMLVLVESELKHRVLGGTIDDAAGECFDKTGKLMGLAYPAGPVIDRLAEQGNPAAYDFPRPLLRDANDDFSFSGLKTSVRYFIRDHPTLLDDRQQVCDLCASVQAAIVEVLVKKTIRAAKREGVRCVTASGGVTCNHALRKELERACKKNGFTLRLAEKNLCTDNAAMIGILAERKLRAGLPATSLDEEIKPGWALA*