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berkeley_reactor_200306_planktonic_scaffold_228973_77

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(86839..89349)

Top 3 Functional Annotations

Value Algorithm Source
Protein-export membrane protein SecD n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XN52_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 843.0
  • Bit_score: 989
  • Evalue 1.40e-285
Protein-export membrane protein SecD {ECO:0000313|EMBL:EEF58714.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 843.0
  • Bit_score: 989
  • Evalue 1.90e-285
protein-export membrane protein SecD similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 847.0
  • Bit_score: 616
  • Evalue 6.80e-174

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2511
ATGAAGCAAAATAACTTTGGGCGGTTCCTCCTCGTGCTTGCGATCATCGTCTGGTCGCTCTATGAAGTTTATCCGCCGACCTCGCGGGATCTGGTGAAGGAATTCGCCGGCAAGGCGCAAAACAAGGACGCCGCGTTCACCAACATCCTGGCCGAAGCGGAGGCGTTACAAAAGACCGGCACAAACAACGAATTCATTGCGTTGCAGCAGGCGGTCGGCACGAACGATCTGCAAAAATATTTCACCTTCCCCGGGGCGCAGAACCAGATTCACCCCAATCTTTACATCCTGAACCGCCTCCAGCGCGAGGCGTCCGGCCGGATCAAGCTCGGCCTGGATTTGCAGGGCGGCACGGCTTTCGTGCTGCAGATGGACACCAGCAAGCTGGCCGACACCAATGAAACCGCCGCCGCCTTGTCGCAGGCCATCGAGGTGCTGCGCAAGCGCGTGGACCGGTTCGGTGTGGCCGAGCCGGTGATCCAGTCTGAAGGCAACGATCGCATCCGGGTCCAGCTCCCCGGGCTCTCGCAGGCGGACAAGGAAAGCGCCAAGGAACAGCTTCAGAAAAGCGCCTACCTCGAATTTCGCATGGTGCATGACAACAGCGACCAGATCCTCGCCAATGGGGATCCCATCCCGCTGGGTTATGAACTGCTGAAACACGTCGAACAGTTGCCCAACAACAAAACCCGTGTTGAGGAATATGTCGTCAAAAAGAAACCGGAAAACGGCCTGGCGGGCGACATCGTGCAAAGCGCGCGGGTGATGCGTGGCACCCTCGGCCAGCCAGAGATTGATTTCACGCTGACGCCGGATGGCGCCAAAAAATTCGGTGAAGTGACCGCCGCCAACGTCGGACACCGGCTCGCCATTGTTTTGGACGGCCAGTTGTATTCCGCGCCGAACATTCAAAGTCCGATTGAAACCGGTGAAGGCCAGATCACCGGCGACTACACCATCCAGCAAGCCACGGAACTGGCCAATGTGTTGCAAAACCCGTTGAAGGCGCCGTTGAAAATCATCTATTCCAGCGACGTTGATCCCACGCTCGGCAAAGACTCGATCCGCAGCGGCATCAATGCCTCCATTTACGGCGTGGTGTTCGTTTCCGGTTTCATGCTGATTTACTACCTGTTCGCCGGTCTGGCGGCCAACATCGCCCTGATCACGAACATCATCATTCTCCTGGGCGTGATGTGCGCGGTCGGCACCACGTTCACGCTGCCGGGCATCGCGGGCGGCGTGTTGACCGTTGGCATGGCGGTGGACGCGAACGTGCTGATTTACGAACGCATTCGCGAAGAACTGGCGAAGGGCAAATCGTTGCGCGGCGCGATTGACGCCGGTTATGCGCGCGCCTTCGGGACGATTTTTGACTCGCACATCACCACCATCATTTCCTCCCTGATTTTGATCTGGAAGGGCACCGGCGAAATCCAGGGCTTCGGCGTGACGCTCACCATCGGTGTGGCCGCCAGCTTGTTCACCGCCCTGGTGGTCACGCGGCTGATCTTCAATTTCCTGATTGACCGCAACATCATCAAATCGCTGCCCATGCTGCATGTCATCCGCAGCGCCAAAGTGAATTTCATGGGCGCGGCCAAGCCGTTGTTCATCGTGACCTGGCTGTTCGTCATTGTTTCGATTGGCTTTGGCATCAGCCGCGGCCATCAGTTGTTCGGCGTGGATTTCCGCGGCGGCGACAGCGCCCGATACAGTTTCACCCAGAAGGTGGGCGAGCAGGCCATTCGTTCCGCGCTCGCGGGCATCGGCGAGCAGGACCCGCAGATTCAATACCAAACCGATGTCAGCAACGGCAAGGAAACCTTGCAGTTGACCACCTCTCCCGATTCCGCGGCCAGGGTGCAGGCGGCGCTGGAGAAGAACCTGCCGCAGGCGCATTTCAAACTGGAAAGCAGCCAGCACGTGGGCGCCACGATGGGGCGGGACATTTTGCAATCGGCGATTATCGCCTCGTTGCTGGCCTTGTTCGGCATTCTGGTTTATGTCGCCTTCCGCTATGAATTTTCGTTTGCCGTCGCCGCGGTGATCGCGGTGTTTCACGACGTGCTGTTTACGATTGGCGCTTACTGTCTGGCCAATGTCACGTCCGGCCGGCAGTTCAACGCCACGGTGGTGGCCGCGTTGCTGACCATCATCGGCTTCTCGATCAACGACAAGATCGTCATCTTTGACCGGATTCGGGAAGACCTGAAACTGGGCGTGCGCGGCACGTTCCGGGAAATCATCAACCAGGCGCTGAACCAGACCCTGAGCCGCACCATCATCACCAGCGGCACGGTGTTCCTGGCCACGCTCTCGCTGTATATCTTCGGCGGCGGCGTGATCAACGACTTTGCCTTCACCTTCCTGGTGGGCATCATCGTCGGCACCTATTCCTCCATCTACATCGCCAGCGTCATTGTGCTGTGGTGGCACAAGGGACAGCGCCCGGCCATCGGCGCCAACGCCACGCCGGTCGCCGTGCAGGGGCAGCCGGCGGTGAAATAA
PROTEIN sequence
Length: 837
MKQNNFGRFLLVLAIIVWSLYEVYPPTSRDLVKEFAGKAQNKDAAFTNILAEAEALQKTGTNNEFIALQQAVGTNDLQKYFTFPGAQNQIHPNLYILNRLQREASGRIKLGLDLQGGTAFVLQMDTSKLADTNETAAALSQAIEVLRKRVDRFGVAEPVIQSEGNDRIRVQLPGLSQADKESAKEQLQKSAYLEFRMVHDNSDQILANGDPIPLGYELLKHVEQLPNNKTRVEEYVVKKKPENGLAGDIVQSARVMRGTLGQPEIDFTLTPDGAKKFGEVTAANVGHRLAIVLDGQLYSAPNIQSPIETGEGQITGDYTIQQATELANVLQNPLKAPLKIIYSSDVDPTLGKDSIRSGINASIYGVVFVSGFMLIYYLFAGLAANIALITNIIILLGVMCAVGTTFTLPGIAGGVLTVGMAVDANVLIYERIREELAKGKSLRGAIDAGYARAFGTIFDSHITTIISSLILIWKGTGEIQGFGVTLTIGVAASLFTALVVTRLIFNFLIDRNIIKSLPMLHVIRSAKVNFMGAAKPLFIVTWLFVIVSIGFGISRGHQLFGVDFRGGDSARYSFTQKVGEQAIRSALAGIGEQDPQIQYQTDVSNGKETLQLTTSPDSAARVQAALEKNLPQAHFKLESSQHVGATMGRDILQSAIIASLLALFGILVYVAFRYEFSFAVAAVIAVFHDVLFTIGAYCLANVTSGRQFNATVVAALLTIIGFSINDKIVIFDRIREDLKLGVRGTFREIINQALNQTLSRTIITSGTVFLATLSLYIFGGGVINDFAFTFLVGIIVGTYSSIYIASVIVLWWHKGQRPAIGANATPVAVQGQPAVK*