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berkeley_reactor_200306_planktonic_scaffold_269654_57

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 75112..75759

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RecO n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS07_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 209.0
  • Bit_score: 230
  • Evalue 1.20e-57
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 209.0
  • Bit_score: 230
  • Evalue 1.70e-57
Recombination protein O RecO similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 114.0
  • Bit_score: 79
  • Evalue 7.70e-13

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 648
ATGATTGAATCCTCCGCCGGCATCATTCTGCGCACCCGGCCGCTGACCGAAACGAGCCTCATCATCCACTGGCTGACCCCGGAACTCGGCCGGCTGGGAACCGTCGCCAAAGGCGCCCGGCGGCCCAAGTCGCCGTTCGCCGGAAAATTGGATTTGTTTTACGCCGCCGGATTTTCCTTCAGCCGCAGCCGGCGCTCAGATTTGCACACTTTGCGGGAAGTGAACCTGATTGAGACACATTCCGGCATCAGGAATCATCTCGGCAAATTGCAACAAGCCGCTTATGCCTCGGCTTTTATCGAACAAACGACCGAAACGGAAGCCCCGCTCCCGGAAATCAGCCGGCTGATGACGGATTTTCTGGCCGGGTTGTGCCGCCAGGCGGCAAAACCGCAGAATATCGTGGCACTGGAATTGAAAATGCTGCGGGAACTGGGTATGGAACCGAATCTCGGGGAAACCCGTTTGACACCGGGCGCAAAGAAAATCGCCGCCGCCCTTTTGGGGGGCGGCTGGGCCGAAATTGCCCGGCTGGCCCTGAGCCCCGCGCAAAGCGACGAGTTGAGCCGCTGGCTGCAACATTTCATGGTTTTTCACCTGGGACATCTTCCGCACGGCCGCGCTGCGGCGCTCGCCGCCGGCGGTTAA
PROTEIN sequence
Length: 216
MIESSAGIILRTRPLTETSLIIHWLTPELGRLGTVAKGARRPKSPFAGKLDLFYAAGFSFSRSRRSDLHTLREVNLIETHSGIRNHLGKLQQAAYASAFIEQTTETEAPLPEISRLMTDFLAGLCRQAAKPQNIVALELKMLRELGMEPNLGETRLTPGAKKIAAALLGGGWAEIARLALSPAQSDELSRWLQHFMVFHLGHLPHGRAAALAAGG*